Files in inDAGO

A GUI for Dual and Bulk RNA-Sequencing Analysis

R/IndexingSequentialUserInterface.R R/volcanoPlottly.R R/pcaPlot.R R/EDAServerLogic.R R/app.R R/qualityControlServerLogic.R R/SummarizationServerLogic.R R/mdsPlottly.R R/mappingCombinedUserInterface.R R/mdsinfo.R R/UpSetPlot.R R/CorrPlotHeatmaply.R R/BaseCompositionAreaChartPlot.R R/IndexingSequentialParallel.R R/BaseQualityBoxplotPlot.R R/barplotExp.R R/pcainfo.R R/HeatmapExp.R R/Filtering.R R/CombinedAlignment.R R/HeatmapExpPlotly.R R/volcanoPlot.R R/Summarization.R R/getDegMerged.R R/counting_Reads.R R/pcaPlottly.R R/DEGsUserInterface.R R/mappingSequentialUserInterface.R R/BaseCompositionLinePlot.R R/Saturation.R R/mappingBulkUserInterface.R R/BulkAlignment.R R/QualityCheckAnalysis.R R/SequenceLengthDistributionPlotly.R R/qualityControlUserInterface.R R/workflowServerLogic.R R/IndexingCombinedServerLogic.R R/checkMetadata.R R/boxplotExp.R R/mdsPlot.R R/SequentialAlignment.R R/EdgerDEG.R R/GCcontentDistributionPlotly.R R/SequenceLengthDistributionPlot.R R/DEGsServerLogic.R R/IndexingComb.R R/CorrPlotHeatmap.R R/workflowUserInterface.R R/IndexingCombinedUserInterface.R R/FilteringUserInterface.R R/EDAUserInterface.R R/GCcontentDistributionPlot.R R/mappingSequentialServerLogic.R R/IndexingBulkServerLogic.R R/FilteringServerLogic.R R/BaseAverageQualityPlot.R R/IndexingSequentialProgressive.R R/GetEdgerY.R R/globals.R R/mappingCombinedServerLogic.R R/UpsetjsPlot.R R/BaseAverageQualityPlotly.R R/IndexingBulk.R R/SummarizationUserInterface.R R/IndexingSequentialServerLogic.R R/mappingBulkServerLogic.R R/IndexingBulkUserInterface.R tests/testthat.R tests/testthat/test-inDAGO_shiny.R man/HeatmapExpPlotly.Rd man/CorrPlotHeatmaply.Rd man/IndexingCombinedUserInterface.Rd man/IndexingBulkUserInterface.Rd man/EDAServerLogic.Rd man/IndexingBulkServerLogic.Rd man/GetEdgerY.Rd man/CombinedAlignment.Rd man/GCcontentDistributionPlot.Rd man/getDegMerged.Rd man/SequenceLengthDistributionPlotly.Rd man/QualityCheckAnalysis.Rd man/BaseAverageQualityPlot.Rd man/mappingSequentialUserInterface.Rd man/BaseAverageQualityPlotly.Rd man/Saturation.Rd man/barplotExp.Rd man/CorrPlotHeatmap.Rd man/mappingSequentialServerLogic.Rd man/BaseQualityBoxplotPlot.Rd man/IndexingSequentialParallel.Rd man/mappingBulkUserInterface.Rd man/pcaPlottly.Rd man/IndexingBulk.Rd man/IndexingSequentialProgressive.Rd man/pcaPlot.Rd man/SequenceLengthDistributionPlot.Rd man/mappingCombinedServerLogic.Rd man/GCcontentDistributionPlotly.Rd man/WorkflowUserInterface.Rd man/BulkAlignment.Rd man/mappingBulkServerLogic.Rd man/mdsinfo.Rd man/FilteringServerLogic.Rd man/SummarizationUserInterface.Rd man/pcainfo.Rd man/DEGsServerLogic.Rd man/BaseCompositionLinePlot.Rd man/IndexingComb.Rd man/mappingCombinedUserInterface.Rd man/DEGsUserInterface.Rd man/EdgerDEG.Rd man/mdsPlot.Rd man/SummarizationServerLogic.Rd man/WorkflowServerLogic.Rd man/IndexingCombinedServerLogic.Rd man/UpsetjsPlot.Rd man/Summarization.Rd man/volcanoPlottly.Rd man/EDAUserInterface.Rd man/BaseCompositionAreaChartPlot.Rd man/SequentialAlignment.Rd man/qualityControlServerLogic.Rd man/FilteringUserInterface.Rd man/checkMetadata.Rd man/inDAGO.Rd man/IndexingSequentialServerLogic.Rd man/qualityControlUserInterface.Rd man/boxplotExp.Rd man/mdsPlottly.Rd man/HeatmapExp.Rd man/UpSetPlot.Rd man/volcanoPlot.Rd man/IndexingSequentialUserInterface.Rd man/counting_Reads.Rd man/Filtering.Rd