ktspair: k-Top Scoring Pairs for Microarray Classification
Version 1.0

These functions compute the k best pairs of genes used to classify samples based on the relative rank of the genes expression within each profile. A score based on the sensitivity and the specificity is calculated for every possible pair. The k pairs with the highest score will be selected with the restriction that a gene can appear in at most one pair. The value of k is either set as a parameter chosen by the user or computed through crossvalidation. Other functions related to the k-TSP are also available, for example the functions prediction, summary, plot, etc. can be found in the package.

Package details

AuthorJulien Damond <[email protected]>
Date of publication2011-12-23 10:06:13
MaintainerJulien Damond <[email protected]>
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("ktspair")

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ktspair documentation built on May 29, 2017, 4:29 p.m.