These functions compute the k best pairs of genes used to classify samples based on the relative rank of the genes expression within each profile. A score based on the sensitivity and the specificity is calculated for every possible pair. The k pairs with the highest score will be selected with the restriction that a gene can appear in at most one pair. The value of k is either set as a parameter chosen by the user or computed through crossvalidation. Other functions related to the k-TSP are also available, for example the functions prediction, summary, plot, etc. can be found in the package.
|Author||Julien Damond <[email protected]>|
|Date of publication||2011-12-23 10:06:13|
|Maintainer||Julien Damond <[email protected]>|
|Package repository||View on CRAN|
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