Description Usage Arguments Details Value Author(s) References See Also Examples
Show a graphical representation of ktsp objects based on the expressions of the genes present in the pairs constituting the k-TSP.
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x |
A ktsp object. |
... |
Plotting arguments, not used |
This is the generic function for ktspplot.
No value is returned. Only a graph is ploted.
Julien Damond julien.damond@gmail.com
D. Geman, C. d'Avignon, D. Naiman and R. Winslow, "Classifying gene expression profiles from pairwise mRNA comparisons," Statist. Appl. in Genetics and Molecular Biology, 3, 2004.
A.C. Tan, D.Q. Naiman, L. Xu, R.L. Winslow, D. Geman, "Simple decision rules for classifying human cancers from gene expression profiles," Bioinformatics, 21: 3896-3904, 2005.
J. Damond, supervised by S. Morgenthaler and S. Hosseinian, "Presentation and study of robustness for several methods to classify individuals based on their gene expressions", Master thesis, Swiss Federal Institute of Technology Lausanne (Switzerland), 2011.
J. Damond, S. Morgenthaler, S. Hosseinian, "The robustness of the TSP and the k-TSP and the computation of ROC curves", paper is submitted in Bioinformatics, December 2011.
Jeffrey T. Leek <jtleek@jhu.edu> (). tspair: Top Scoring Pairs for Microarray Classification. R package version 1.10.0.
ktspcalc
, kts.pair
,predict.ktsp
, summary.ktsp
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