allocateCroptypeCultivars: Allocate cultivars to one croptype

In landsepi: Landscape Epidemiology and Evolution

Allocate cultivars to one croptype

Description

Updates a given croptype by allocating cultivars composing it.

Usage

allocateCroptypeCultivars(
  croptypes,
  croptypeName,
  cultivarsInCroptype,
  prop = NULL
)

Arguments

croptypes	a dataframe containing all croptypes, initialised via loadCroptypes
croptypeName	the name of the croptype to be allocated
cultivarsInCroptype	name of cultivars composing the croptype
prop	vector of proportions of each cultivar in the croptype. Default to balanced proportions.

Value

a croptype data.frame updated for the concerned croptype.

See Also

setCroptypes, setCultivars

Examples

## Not run: 
simul_params <- createSimulParams()
cultivar1 <- loadCultivar(name = "Susceptible", type = "growingHost")
cultivar2 <- loadCultivar(name = "Resistant1", type = "growingHost")
cultivar3 <- loadCultivar(name = "Resistant2", type = "growingHost")
cultivars <- data.frame(rbind(cultivar1, cultivar2, cultivar3), stringsAsFactors = FALSE)
simul_params <- setCultivars(simul_params, cultivars)
croptypes <- loadCroptypes(simul_params, names = c("Susceptible crop", "Mixture"))
croptypes
croptypes <- allocateCroptypeCultivars(croptypes, "Susceptible crop", "Susceptible")
croptypes <- allocateCroptypeCultivars(croptypes, "Mixture", c("Resistant1", "Resistant2"))
croptypes

## End(Not run)

landsepi documentation built on July 26, 2023, 5:36 p.m.