API for lfmm
Latent Factor Mixed Models
| Global functions | |
|---|---|
| Dat | Source code |
| LfmmDat | Source code |
| SimulatedLfmmDat | Source code |
| compute_B_lasso | Source code |
| compute_B_ridge | Source code |
| compute_P | Source code |
| compute_eigen_svd | Source code |
| compute_gif | Source code |
| compute_pvalue_from_tscore | Source code |
| compute_pvalue_from_zscore | Source code |
| compute_pvalue_from_zscore2 | Source code |
| compute_svd | Source code |
| compute_svd_soft | Source code |
| effect_size | Man page Source code |
| err2_lfmm_cpp | Source code |
| err2s_lfmm_cpp | Source code |
| example.data | Man page |
| glm_test | Man page Source code |
| hypothesis_testing_lm | Source code |
| impute_lfmm_cpp | Source code |
| impute_median | Source code |
| lassoLFMM | Source code |
| lassoLFMM_heuristic_gamma_lambda_range | Source code |
| lassoLFMM_init | Source code |
| lassoLFMM_loop | Source code |
| lassoLFMM_main | Source code |
| lfmm | Man page |
| lfmm_fit | Source code |
| lfmm_fit.lassoLFMM | Source code |
| lfmm_fit.ridgeLFMM | Source code |
| lfmm_fit_knowing_loadings | Source code |
| lfmm_fit_knowing_loadings.ridgeLFMM | Source code |
| lfmm_impute | Source code |
| lfmm_lasso | Man page Source code |
| lfmm_residual_error2 | Source code |
| lfmm_ridge | Man page Source code |
| lfmm_sampler | Man page Source code |
| lfmm_test | Man page Source code |
| predict_lfmm | Man page Source code |
| read_input | Source code |
| ridgeLFMM | Source code |
| ridgeLFMM_init | Source code |
| ridgeLFMM_main | Source code |
| ridgeLFMM_noNA | Source code |
| ridgeLFMM_noNA_alternated | Source code |
| ridgeLFMM_withNA | Source code |
| skin.exposure | Man page |
| sum2_lm_cpp | Source code |
