API for lilikoi
Metabolomics Personalized Pathway Analysis Tool

Global functions
data.hmdb Man page
data.metaboAnalyst Man page
data.smpdb Man page
getmeasuredgenesinpathway Source code
getpathway Source code
lilikoi._get_results_summary Source code
lilikoi.adjust_model Man page Source code
lilikoi.corr_matrix_plot Source code
lilikoi.create_the_model Source code
lilikoi.get_match_matrix Source code
lilikoi.get_pathways_with_their_metabolites Source code
lilikoi.get_pd_scores Man page Source code
lilikoi.id_mapping Source code
lilikoi.machine_learning Man page Source code
lilikoi.metab_to_pathway Man page Source code
lilikoi.name_mapping_exact Source code
lilikoi.path_mapping Source code
lilikoi.plot_significant_pathways Source code
lilikoi.print_results_summary Source code
lilikoi.select_pathways Man page Source code
quantify_pathways_deregulation Source code
release_questions Source code
samplings_stdev Source code
score_all_pathways_helper Source code
score_pathway Source code
lilikoi documentation built on July 30, 2018, 5:01 p.m.