mLLMCelltype: Cell Type Annotation Using Large Language Models

Automated cell type annotation for single-cell RNA sequencing data using consensus predictions from multiple large language models. Integrates with Seurat objects and provides uncertainty quantification for annotations. Supports various LLM providers including OpenAI, Anthropic, and Google. For details see Yang et al. (2025) <doi:10.1101/2025.04.10.647852>.

Package details

AuthorChen Yang [aut, cre, cph]
MaintainerChen Yang <cafferychen777@tamu.edu>
LicenseMIT + file LICENSE
Version2.0.5
URL https://cafferyang.com/mLLMCelltype/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("mLLMCelltype")

Try the mLLMCelltype package in your browser

Any scripts or data that you put into this service are public.

mLLMCelltype documentation built on May 11, 2026, 9:06 a.m.