estimate_autotheta_subpops_unweighted_pids: Unweighted estimate of autosomal theta from subpopulations of...
In malan: MAle Lineage ANalysis
estimate_autotheta_subpops_unweighted_pids R Documentation
Unweighted estimate of autosomal theta from subpopulations of individual ids
Description
Estimates unweighted autosomal theta for a number of subpopulations given a list of pids (individual ids).
Usage
estimate_autotheta_subpops_unweighted_pids(population, subpops, assume_HWE)
Arguments
population
Population obtain from simulation
subpops
List of individual pids
assume_HWE
if the alleles themselves are used instead of genotypes
Details
Assumes that pedigrees_all_populate_autosomal() was used first to populate autosomal genotypes.
Based on Weir and Goudet, Genetics 2017:
http://www.genetics.org/content/early/2017/05/26/genetics.116.198424
Value
Estimate of autosomal theta
malan documentation built on July 4, 2024, 9:09 a.m.
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| estimate_autotheta_subpops_unweighted_pids | R Documentation |
Unweighted estimate of autosomal theta from subpopulations of individual ids
Description
Estimates unweighted autosomal theta for a number of subpopulations given a list of pids (individual ids).
Usage
estimate_autotheta_subpops_unweighted_pids(population, subpops, assume_HWE)
Arguments
population |
Population obtain from simulation |
subpops |
List of individual pids |
assume_HWE |
if the alleles themselves are used instead of genotypes |
Details
Assumes that pedigrees_all_populate_autosomal() was used first to populate autosomal genotypes.
Based on Weir and Goudet, Genetics 2017: http://www.genetics.org/content/early/2017/05/26/genetics.116.198424
Value
Estimate of autosomal theta
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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