| .onUnload |
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| RcppArmadilloFastLm |
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| [[.malan_pedigreelist |
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| [[.malan_population |
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| `[[.malan_pedigreelist` |
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| `[[.malan_population` |
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| analyse_mixture_result |
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| analyse_mixture_results |
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| as_tbl_graph.malan_pedigreelist |
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| brothers_matching |
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| build_haplotype_hashmap |
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| build_pedigrees |
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| calc_autosomal_genotype_conditional_cumdist |
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| calc_autosomal_genotype_probs |
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| construct_M |
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| construct_M_mpfr |
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| count_brothers |
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| count_haplotype_near_matches_individuals |
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| count_haplotype_occurrences_individuals |
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| count_haplotype_occurrences_pedigree |
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| count_uncles |
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| delete_haplotypeids_hashmap |
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| estimate_autotheta_1subpop_genotypes |
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| estimate_autotheta_1subpop_individuals |
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| estimate_autotheta_subpops_genotypes |
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| estimate_autotheta_subpops_individuals |
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| estimate_autotheta_subpops_pids |
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| estimate_autotheta_subpops_unweighted_genotypes |
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| estimate_autotheta_subpops_unweighted_pids |
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| father_matches |
Man page
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| from_igraph |
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| from_igraph_rcpp |
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| generate_get_founder_haplotype_db |
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| generate_get_founder_haplotype_ladder |
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| get_allele_counts_genotypes |
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| get_allele_counts_pids |
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| get_brothers |
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| get_children |
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| get_cousins |
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| get_family_info |
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| get_father |
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| get_generation |
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| get_haplotype |
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| get_haplotypes_in_pedigree |
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| get_haplotypes_individuals |
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| get_haplotypes_pids |
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| get_individual |
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| get_individuals |
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| get_matching_pids_from_hashmap |
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| get_nodes_edges |
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| get_pedigree |
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| get_pedigree_as_graph |
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| get_pedigree_edgelist |
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| get_pedigree_from_individual |
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| get_pedigree_id |
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| get_pedigree_id_from_pid |
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| get_pedigrees_tidy |
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| get_pid |
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| get_pids_in_pedigree |
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| get_uncles |
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| get_zero_haplotype_generator |
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| grandfather_matches |
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| haplotype_matches_individuals |
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| haplotype_partially_matches_individuals |
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| haplotypes_to_hashes |
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| hash_colisions |
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| infer_generations |
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| load_individuals |
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| malan |
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| malan-package |
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| meioses_generation_distribution |
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| meiotic_dist |
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| mixture_info_by_individuals_2pers |
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| mixture_info_by_individuals_3pers |
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| mixture_info_by_individuals_4pers |
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| mixture_info_by_individuals_5pers |
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| pedigree_as_igraph |
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| pedigree_haplotype_matches_in_pedigree_meiosis_L1_dists |
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| pedigree_haplotype_near_matches_meiosis |
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| pedigree_size |
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| pedigree_size_generation |
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| pedigrees_all_populate_autosomal |
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| pedigrees_all_populate_haplotypes |
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| pedigrees_all_populate_haplotypes_custom_founders |
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| pedigrees_all_populate_haplotypes_ladder_bounded |
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| pedigrees_count |
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| pedigrees_table |
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| plot.malan_pedigree |
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| plot.malan_pedigreelist |
Man page
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| pop_size |
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| population_populate_autosomal_infinite_alleles |
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| population_size_generation |
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| print.malan_pedigree |
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| print.malan_pedigreelist |
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| print.malan_population |
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| print.malan_population_abort |
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| print_individual |
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| print_pedigree |
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| relationship_allele_diff_dist |
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| relationship_allele_diff_dist_matmult |
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| relationship_allele_diff_dist_matmult_Rmpfr |
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| relationship_allele_diff_dist_matmult_worker |
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| relationship_allele_diff_dist_sym |
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| relationship_allele_diff_dist_worker |
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| sample_autosomal_genotype |
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| sample_geneology |
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| sample_geneology_varying_size |
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| split_by_haplotypes |
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| stop_invalid_id |
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| test_create_population |
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| verify_input_meioses_mu_dw_mu_up |
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| ystr_kits |
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| ystr_markers |
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