mapfit.group: MAP fitting with grouped data

In mapfit: PH/MAP Parameter Estimation

MAP fitting with grouped data

Description

Estimates MAP parameters from grouped data.

Usage

mapfit.group(map, counts, breaks, intervals, instants, ...)

Arguments

map	An object of R6 class. The estimation algorithm is selected depending on this class.
counts	A vector of the number of points in intervals.
breaks	A vector for a sequence of points of boundaries of intervals. This is equivalent to c(0,cumsum(intervals)). If this is missing, it is assigned to 0:length(counts).
intervals	A vector of time lengths for intervals. This is equivalent to diff(breaks)). If this is missing, it is assigned to rep(1,length(counts)).
instants	A vector of integers to indicate whether sample is drawn at the last of interval. If instant is 1, a sample is drawn at the last of interval. If instant is 0, no sample is drawn at the last of interval. By using instant, point data can be expressed by grouped data. If instant is missing, it is given by rep(0L,length(counts)), i.e., there are no samples at the last of interval.
...	Further options for EM steps.

Value

Returns a list with components, which is an object of S3 class mapfit.result;

model	an object for estimated MAP class.
llf	a value of the maximum log-likelihood.
df	a value of degrees of freedom of the model.
aic	a value of Akaike information criterion.
iter	the number of iterations.
convergence	a logical value for the convergence of estimation algorithm.
ctime	computation time (user time).
data	an object for data class
aerror	a value of absolute error for llf at the last step of algorithm.
rerror	a value of relative error for llf at the last step of algorithm.
options	a list of options used in the fitting.
call	the matched call.

Examples

## load trace data
data(BCpAug89)
BCpAug89s <- head(BCpAug89, 50)

## make grouped data
BCpAug89.group <- hist(cumsum(BCpAug89s),
                         breaks=seq(0, 0.15, 0.005),
                         plot=FALSE)
                         
## MAP fitting for general MAP
(result1 <- mapfit.group(map=map(2),
                        counts=BCpAug89.group$counts,
                        breaks=BCpAug89.group$breaks))
## MAP fitting for MMPP
(result2 <- mapfit.group(map=mmpp(2),
                         counts=BCpAug89.group$counts,
                         breaks=BCpAug89.group$breaks))
                         
## MAP fitting with approximate MMPP
(result3 <- mapfit.group(map=gmmpp(2),
                         counts=BCpAug89.group$counts,
                         breaks=BCpAug89.group$breaks))

## marginal moments for estimated MAP
map.mmoment(k=3, map=result1$model)
map.mmoment(k=3, map=result2$model)
map.mmoment(k=3, map=result3$model)

## joint moments for estimated MAP
map.jmoment(lag=1, map=result1$model)
map.jmoment(lag=1, map=result2$model)
map.jmoment(lag=1, map=result3$model)

## lag-k correlation
map.acf(map=result1$model)
map.acf(map=result2$model)
map.acf(map=result3$model)

mapfit documentation built on Nov. 22, 2022, 5:05 p.m.