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marked: Mark-Recapture Analysis for Survival and Abundance Estimation
Functions for fitting various models to capture-recapture data including mixed-effects Cormack-Jolly-Seber(CJS) and multistate models and the multi-variate state model structure for survival estimation and POPAN structured Jolly-Seber models for abundance estimation. There are also Hidden Markov model (HMM) implementations of CJS and multistate models with and without state uncertainty and a simulation capability for HMM models.
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Package details |
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| Author | Jeff Laake <jefflaake@gmail.com>, Devin Johnson <devin.johnson@noaa.gov>, Paul Conn <paul.conn@noaa.gov>, example for simHMM from Jay Rotella |
| Maintainer | Jeff Laake <jefflaake@gmail.com> |
| License | GPL (>= 2) |
| Version | 1.2.8 |
| Package repository | View on CRAN |
| Installation |
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