sureau_ecos: Sureau-ECOS inner functions for testing only

In medfate: Mediterranean Forest Simulation

Sureau-ECOS inner functions for testing only

Description

Function initSureauNetworks initializes hydraulic networks for all plant cohorts in x Function semi_implicit_integration updates water potentials and cavitation across the hydraulic network

Usage

initSureauNetworks(x)

semi_implicit_integration(
  network,
  dt,
  opt,
  stemCavitationRecovery = "annual",
  leafCavitationRecovery = "total"
)

Arguments

x	An object of class spwbInput or growthInput created using transpirationMode = "Sureau".
network	A hydraulic network element of the list returned by initSureauNetworks
dt	Smallest time step (seconds)
opt	Option flag vector
stemCavitationRecovery, leafCavitationRecovery	A string indicating how refilling of embolized conduits is done: "none" - no refilling. "annual" - every first day of the year. "rate" - following a rate of new sapwood formation. "total" - instantaneous complete refilling.

Value

Function initSureauNetworks returns a vector of length equal to the number of cohorts. Each element is a list with Sureau-ECOS parameters. Function semi_implicit_integration does not return anything, but modifies input parameter network.

Author(s)

• Miquel De Cáceres Ainsa, CREAF

• Nicolas Martin-StPaul, URFM-INRAE

References

Ruffault J, Pimont F, Cochard H, Dupuy JL, Martin-StPaul N (2022) SurEau-Ecos v2.0: a trait-based plant hydraulics model for simulations of plant water status and drought-induced mortality at the ecosystem level. Geoscientific Model Development 15, 5593-5626 (doi:10.5194/gmd-15-5593-2022).

See Also

spwb

medfate documentation built on April 4, 2025, 2:01 a.m.