addReactFixed: A fixed version of sybil::addReact

In metaboGSE: Gene Set Enrichment Analysis via Integration of Metabolic Networks and RNA-Seq Data

Description

The function fixes sybil::addReact to avoid deprecated functions rBind and cBind.

Usage

addReactFixed(
  model,
  id,
  met,
  Scoef,
  reversible = FALSE,
  lb = 0,
  ub = SYBIL_SETTINGS("MAXIMUM"),
  obj = 0,
  subSystem = NA,
  gprAssoc = NA,
  reactName = NA,
  metName = NA,
  metComp = NA
)

Arguments

model	See addReact.
id	See addReact.
met	See addReact.
Scoef	See addReact.
reversible	See addReact.
lb	See addReact.
ub	See addReact.
obj	See addReact.
subSystem	See addReact.
gprAssoc	See addReact.
reactName	See addReact.
metName	See addReact.
metComp	See addReact.

Value

An object of class modelorg.

metaboGSE documentation built on Oct. 23, 2020, 8:14 p.m.