pwDesc: Description of gene set IDs

In metaboGSE: Gene Set Enrichment Analysis via Integration of Metabolic Networks and RNA-Seq Data

Description

This function returns the description of given gene set IDs, e.g. GO, KEGG.

Usage

pwDesc(x, desc.data = NULL)

Arguments

x	A vector of gene set IDs.
desc.data	A named vector of descriptions of all studied gene set IDs. Default: NULL, AnnotationDbi is used if x is a GO term ID. KEGGREST will be called with internet connection required if x is a KEGG pathway ID.

Value

Description

Examples

pwDesc("GO:0006696")
pwDesc("genesetX", desc.data=setNames("processX", "genesetX"))

pwDesc("hsa04930")

metaboGSE documentation built on Oct. 23, 2020, 8:14 p.m.