get_taxmap_cols: Get a column subset

In metacoder: Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data

Get a column subset

Description

Convert logical, names, or indexes to column names and check that they exist.

Usage

get_taxmap_cols(obj, data, cols = NULL)

Arguments

obj	A taxmap object
data	The name of a table in obj that contains counts.
cols	The columns in the data set to use. Takes one of the following inputs: TRUE/FALSE: All non-target columns will be preserved or not. Vector of TRUE/FALSE of length equal to the number of columns: Preserve the columns corresponding to TRUE values. Character vector: The names of columns to preserve Numeric vector: The indexes of columns to preserve

See Also

Other option parsers: get_taxmap_data(), get_taxmap_other_cols(), get_taxmap_table(), verify_taxmap()

metacoder documentation built on April 3, 2025, 8:39 p.m.