Description Usage Arguments Details See Also Examples
View source: R/addAei_function.R
addAei
returns a list with the twentieth element as dataframe with allele specific data from GTEx.
1 | addAei(mgl, fpsource)
|
mgl |
List; see |
fpsource |
A character string of with the filepath where the data has been downloaded |
This gives allele specific expression RNAsequencing data as reported by GTEx for the gene of interest. See http://www.gtexportal.org/. It pulls data based on the ENSG identifier.
Other elements: addAntisense
,
addCisEqtl
, addDnase
,
addEnst
, addExpression
,
addGo
, addGrasp
,
addGwasCatalog
, addLoc
,
addPtv
, addPubmed
,
addSqtlAltrans
, addSqtlSeek
,
addTransEqtl
, missNames
1 2 | ## Not run: buildFromRegion(chr = 2, start = 102314000, stop = 103435000) -> myMgl
## Not run: myMgl <- addAei(myMgl, fpsource = "/Downloads")
|
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