reverseComplement: Reverse-complementation of DNA

Description Usage Arguments Details Value Author(s) Examples

Description

The standard reverse-complement of nucleotide sequences.

Usage

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reverseComplement(nuc.sequences, reverse = TRUE)

Arguments

nuc.sequences

Character vector containing the nucleotide sequences.

reverse

Logical indicating if complement should be reversed.

Details

This function uses the Biostrings::reverseComplement function.

Value

A character vector of reverse-complemented sequences.

Author(s)

Lars Snipen and Kristian Hovde Liland.

Examples

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ex.file <- file.path(file.path(path.package("microseq"),"extdata"),"small.fasta")
fdta <- readFasta(ex.file)
reverseComplement(fdta$Sequence)


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