getHaploGroupProb | Get haplotype group probability |
getValidHaploGroups | Get haplo groups for a genotype |
listGenoToTable | Genotype list to genotype table |
listHaploToTable | Haplotype list to Haplotype table. |
listValidHaplotypes | List valid haplotypes |
mlPhaser-package | mlPhaser |
phaseReport | Best/all hapltype groups for a genotype |
printHaploGroups | Print haplotype groups |
printHaploProbs | Print haplo group probabilities |
recurseHaplos | Recurse to get haplo groups |
reduceRedundantList | Remove redundant haplotype groups |
remGeno | Extract haplotype from genotype |
simGenoFromHaplo | Simulate genotypes |
tableGenoToList | Convert genotype table to list of lists |
tableHaploToList | Haplotype table to haplotype list |
testHaploInGeno | Test genotype for presence of haplotype |
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