tableHaploToList: Haplotype table to haplotype list
In mlPhaser: Multi-Locus Haplotype Phasing
Description
Usage
Arguments
Details
Value
Description
Converts a data.frame of haplotypes to a list of lists
with haplotypes at the top level and list of loci (with
their alleles) beneath.
Usage
1
2
tableHaploToList(haploTable,
locusNames = colnames(haploTable))
Arguments
haploTable
A data.frame of alleles making up the
haplotypes. One columm per locus, one row per haplotype.
The rownames should contain the haplotype ids.
locusNames
A character vector giving the names of
the loci which should match the column names of the
haploTable
Details
Summary paragraph outlining method
Value
Haplotypes as a list of lists.
mlPhaser documentation built on May 2, 2019, 7:59 a.m.
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Description Usage Arguments Details Value
Description
Converts a data.frame of haplotypes to a list of lists with haplotypes at the top level and list of loci (with their alleles) beneath.
Usage
1 2 | tableHaploToList(haploTable,
locusNames = colnames(haploTable))
|
Arguments
haploTable |
A data.frame of alleles making up the haplotypes. One columm per locus, one row per haplotype. The rownames should contain the haplotype ids. |
locusNames |
A character vector giving the names of the loci which should match the column names of the haploTable |
Details
Summary paragraph outlining method
Value
Haplotypes as a list of lists.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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