reduceRedundantList: Remove redundant haplotype groups
In mlPhaser: Multi-Locus Haplotype Phasing
Description
Usage
Arguments
Details
Value
Description
Removes redundant groups of haplotypes from a common
list.
Usage
1
reduceRedundantList(startList)
Arguments
startList
A list of haplotype groups (each is a
list of haplotypes).
Details
The recursive method recurseHaplos of
finding groups of consistent haplotypes does not
differentiate, re-arranged versions of the same set. e.g.
keeps aaa/bbb AND bbb/aaa. This function removes that
redundancy from the results. uses the length of intersect
to determine if two lists contain all the same elements.
Value
A list of haplotype groups but each group is unique.
mlPhaser documentation built on May 2, 2019, 7:59 a.m.
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Description Usage Arguments Details Value
Description
Removes redundant groups of haplotypes from a common list.
Usage
1 | reduceRedundantList(startList)
|
Arguments
startList |
A list of haplotype groups (each is a list of haplotypes). |
Details
The recursive method recurseHaplos of
finding groups of consistent haplotypes does not
differentiate, re-arranged versions of the same set. e.g.
keeps aaa/bbb AND bbb/aaa. This function removes that
redundancy from the results. uses the length of intersect
to determine if two lists contain all the same elements.
Value
A list of haplotype groups but each group is unique.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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