Files in mnirs
Muscle Near-Infrared Spectroscopy Processing and Analysis
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/validate_mnirs.R
R/analyse_biexponential.R
R/plot.mnirs.R
R/analyse_kinetics.R
R/mnirs_methods.R
R/analyse_sigmoidal.R
R/shift_mnirs.R
R/read_mnirs_helpers.R
R/replace_mnirs.R
R/data.R
R/extract_intervals.R
R/analyse_sigmoidal_drift.R
R/resample_mnirs.R
R/rolling_helpers.R
R/channel_args.R
R/mnirs-package.R
R/signif_trailing.R
R/analyse_monoexponential.R
R/extract_interval_helpers.R
R/analyse_response_time.R
R/rescale_mnirs.R
R/correct_blood_volume.R
R/filter_mnirs.R
R/read_mnirs.R
R/analyse_exponential_drift.R
R/as_data_list.R
R/aanalyse_kinetics_helpers.R
R/analyse_peak_slope.R
inst/doc/reading-mnirs-data.qmd
inst/doc/reading-mnirs-data.R
inst/doc/reading-mnirs-data.html
inst/extdata/moxy_ramp.xlsx
inst/extdata/train.red_intervals.csv
inst/extdata/moxy_intervals.csv
inst/extdata/pionirs_occlusion.ftn
inst/extdata/artinis_intervals.xlsx
inst/extdata/portamon_oxcap.xlsx
inst/skills/AGENTS.md
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-plot.mnirs.R
tests/testthat/test-plot.mnirs_kinetics.R
tests/testthat/test-resample_mnirs.R
tests/testthat/test-signif_trailing.R
tests/testthat/test-call-attribution.R
tests/testthat/test-rolling_helpers.R
tests/testthat/test-analyse_biexponential.R
tests/testthat/test-validate_mnirs.R
tests/testthat/test-analyse_response_time.R
tests/testthat/test-filter_mnirs.R
tests/testthat/test-read_mnirs.R
tests/testthat/test-as_data_list.R
tests/testthat/test-analyse_monoexponential.R
tests/testthat/test-extract_intervals.R
tests/testthat/test-analyse_peak_slope.R
tests/testthat/test-analyse_kinetics.R
tests/testthat/test-rescale_mnirs.R
tests/testthat/test-shift_mnirs.R
tests/testthat/Rplots.pdf
tests/testthat/test-analyse_sigmoidal.R
tests/testthat/test-correct_blood_volume.R
tests/testthat/test-analyse_exponential_drift.R
tests/testthat/test-analyse_sigmoidal_drift.R
tests/testthat/test-replace_mnirs.R
tests/testthat/test-channel_args.R
vignettes/reading-mnirs-data.qmd
vignettes/_quarto.yaml
vignettes/apa.csl
man/preserve_metadata.Rd
man/SSlogistic.Rd
man/analyse_response_time.Rd
man/read_mnirs.Rd
man/analyse_kinetics_channels.Rd
man/create_mnirs_data.Rd
man/remove_empty_rows_cols.Rd
man/preserve_na.Rd
man/init_asymptotes.Rd
man/fit_exponential_drift.Rd
man/recycle_to_length.Rd
man/breaks_timespan.Rd
man/plot.mnirs_kinetics.Rd
man/logistic_init.Rd
man/as_mnirs_interval.Rd
man/biexponential.Rd
man/sigdrift_rate.Rd
man/pionirs_occlusion.ftn.Rd
man/build_fit_results.Rd
man/warn_call.Rd
man/sigdrift_onset.Rd
man/gompertz.Rd
man/fit_biexponential.Rd
man/scale_colour_mnirs.Rd
man/monoexponential.Rd
man/solve_grid3.Rd
man/logistic.Rd
man/correct_blood_volume.Rd
man/theme_mnirs.Rd
man/select_channels.Rd
man/peak_slope.Rd
man/analyse_kinetics.Rd
man/analyse_exponential_drift.Rd
man/print.mnirs.Rd
man/fit_monoexponential.Rd
man/replace_mnirs.Rd
man/analyse_biexponential.Rd
man/fit_td_fallback.Rd
man/fit_sigmoidal.Rd
man/plot.mnirs.Rd
man/artinis_intervals.xlsx.Rd
man/validate_fix.Rd
man/name_channels.Rd
man/resolve_interval.Rd
man/normalise_interval_groups.Rd
man/sigdrift_init.Rd
man/validate_kinetics_args.Rd
man/analyse_kinetics_intervals.Rd
man/ensemble_intervals.Rd
man/train.red_intervals.csv.Rd
man/setup_kinetics_worker.Rd
man/palette_mnirs.Rd
man/moxy_ramp.xlsx.Rd
man/clean_cnd_message.Rd
man/embed_fit_call.Rd
man/filter_moving_average.Rd
man/monoexp_start.Rd
man/detect_mnirs_device.Rd
man/SSexponential_drift.Rd
man/is_empty.Rd
man/expdrift_start.Rd
man/apply_interval_groups.Rd
man/kinetics_warnings_df.Rd
man/mnirs_metadata.Rd
man/monoexp_model.Rd
man/within.Rd
man/biexp_init.Rd
man/monoexp_init.Rd
man/biexp_start.Rd
man/fit_names.Rd
man/device_patterns.Rd
man/oxysoft_sample_rate.Rd
man/analyse_monoexponential.Rd
man/expdrift_init.Rd
man/find_header_row.Rd
man/rolling_slope.Rd
man/detect_time_channel.Rd
man/full_coefs.Rd
man/abort_validation.Rd
man/SSgompertz.Rd
man/detect_dttm_format.Rd
man/compute_diagnostics.Rd
man/kinetics_annotations.Rd
man/SSsigmoidal_drift.Rd
man/warn_fit_failed.Rd
man/map_mnirs_intervals.Rd
man/moxy_intervals.csv.Rd
man/hms_to_seconds.Rd
man/build_kinetics_results.Rd
man/SSmonoexponential.Rd
man/analyse_peak_slope.Rd
man/as_data_list.Rd
man/rescale_mnirs.Rd
man/analyse_sigmoidal_drift.Rd
man/exponential_drift.Rd
man/example_mnirs.Rd
man/clean_channel_names.Rd
man/shift_mnirs.Rd
man/sigdrift_texc.Rd
man/analyse_logistic.Rd
man/fit_sigmoidal_drift.Rd
man/signif_trailing.Rd
man/find_interval_time.Rd
man/read_file.Rd
man/filter_butterworth.Rd
man/print.mnirs_kinetics.Rd
man/apply_span.Rd
man/detect_irregular_samples.Rd
man/fit_control.Rd
man/count_decimals.Rd
man/parse_channel_name.Rd
man/accept_port_fit.Rd
man/biexp_core.Rd
man/resolve_fixed_params.Rd
man/seq_range.Rd
man/convert_type.Rd
man/enforce_direction.Rd
man/parse_time_channel.Rd
man/SSbiexponential.Rd
man/resolve_channels.Rd
man/extract_start_timestamp.Rd
man/filter_mnirs.Rd
man/gompertz_init.Rd
man/sigmoid_core.Rd
man/resolve_channel_args.Rd
man/detect_direction.Rd
man/expdrift_model.Rd
man/split_kinetics_groups.Rd
man/expdrift_onset.Rd
man/sigdrift_model.Rd
man/is_arg_map.Rd
man/sigmoidal_drift.Rd
man/recycle_param.Rd
man/find_kinetics_idx.Rd
man/count_sigfigs.Rd
man/validate_group_channels.Rd
man/by_time.Rd
man/response_time.Rd
man/recycle_span.Rd
man/validate_findInt.Rd
man/extract_intervals.Rd
man/as_plot_data.Rd
man/extract_df_list.Rd
man/portamon_oxcap.xlsx.Rd
man/validate_mnirs.Rd
man/wrap.Rd
man/warn_map_keys.Rd
man/parse_dttm.Rd
man/free_params.Rd
man/validate_interval_channels.Rd
man/sigdrift_start.Rd
man/mnirs-package.Rd
man/validate_start_time.Rd
man/compute_helpers.Rd
man/build_ss_formula.Rd
man/parse_oxysoft_legend.Rd
man/zero_offset_data.Rd
man/format_hmmss.Rd
man/init_inflection.Rd
man/rename_duplicates.Rd
man/build_na_results.Rd
man/resolve_interval_args.Rd
man/dttm_opts.Rd
man/init_fixed.Rd
man/resample_mnirs.Rd
man/figures/README-extract_intervals_ensemble-1.png
man/figures/lifecycle-stable.svg
man/figures/lifecycle-superseded.svg
man/figures/README-pipeline-1.png
man/figures/README-shift_mnirs-1.png
man/figures/mnirs-hex.svg
man/figures/README-rescale_mnirs-1.png
man/figures/README-extract_intervals_distinct-1.png
man/figures/README-read_mnirs-1.png
man/figures/lifecycle-experimental.svg
man/figures/lifecycle-deprecated.svg
man/figures/README-filter_mnirs-1.png
man/figures/README-replace_mnirs-1.png
