computeFilteredVectors

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Description

filters and computes verctors based on gene profiles from a single matrix or a list of matrix profiles

Usage

1
computeFilteredVectors(profile, type = "mean", filt = 0, debug = FALSE)

Arguments

profile

: list of (or unique) matrix profiles

type

: vectorisation method, vectors are calculated from the mean, median or sum of a given list of genes; default type="mean" otherwise it will be "median" or "sum"

filt

: filtering threshold in and sparse values put to 0 default filt= 0, no filtering

debug

: default is FALSE, when TRUE information on advancement is printed

Details

computeFilteredVectors

Value

a filtered vector or a matrix of filtered vectors

Author(s)

Edi Prifti & Emmanuelle Le Chatelier

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