listCodingErrorsInfiniteSelfing: Generate a list of encoding errors assuming infinite selfing
In mpMap2: Genetic Analysis of Multi-Parent Recombinant Inbred Lines

Description Usage Arguments Details Value

Generate a list of encoding errors assuming infinite selfing

1	listCodingErrorsInfiniteSelfing(founders, finals)

`founders`	Genetic data for the founding lines of the population
`finals`	Genetic data for the final lines of the population

Generate a list of encoding errors assuming infinite selfing. Given the infinite selfing assumption, no information about heterozygote encoding is required.

List with the following entries:

finals: Markers with an invalid observed value.
null: Markers with a missing value for a founding line, for which the are observations for at least one genetic line.
missingHetData: Markers for which a homozygote did not have an encoding.
invalidHetData: Markers for which the heterozygote encoding data was invalid.