API for mpwR
Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics
| Global functions | |
|---|---|
| add_analysis_col | Source code |
| calculate_CV | Source code |
| create_example | Man page Source code |
| generate_DC_Report | Source code |
| generate_DC_Report_percentage | Source code |
| generate_DC_Report_profile | Source code |
| generate_DC_count | Source code |
| generate_MC_Report_percentage | Source code |
| generate_level_count | Source code |
| get_CV_IDs | Source code |
| get_CV_LFQ_pep | Man page Source code |
| get_CV_LFQ_pg | Man page Source code |
| get_CV_RT | Man page Source code |
| get_DC_Report | Man page Source code |
| get_DC_summary | Source code |
| get_ID_Report | Man page Source code |
| get_MC_Report | Man page Source code |
| get_Upset_list | Man page Source code |
| get_full_profile | Source code |
| get_index | Source code |
| get_mc_zero | Source code |
| get_median | Source code |
| get_summary | Source code |
| get_summary_Report | Man page Source code |
| get_summary_percentage | Source code |
| import_mpwR | Source code |
| is.integer64 | Source code |
| join_DC_levels | Source code |
| load_experimental_design | Man page Source code |
| make_frame_DC | Source code |
| plot_CV_density | Man page Source code |
| plot_DC_barplot | Man page Source code |
| plot_DC_stacked_barplot | Man page Source code |
| plot_ID_barplot | Man page Source code |
| plot_ID_boxplot | Man page Source code |
| plot_MC_barplot | Man page Source code |
| plot_MC_stacked_barplot | Man page Source code |
| plot_Upset | Man page Source code |
| plot_radarchart | Man page Source code |
| prepare_input | Source code |
| prepare_mpwR | Man page Source code |
| prepare_stacked_barplot | Source code |
| reorder_ID_Report | Source code |
| tidy_MQ_LFQ | Source code |
| tidy_MQ_pep_pg | Source code |
| viz_CV_density | Source code |
| viz_DC_barplot | Source code |
| viz_DC_stacked_barplot | Source code |
| write_experimental_design | Man page Source code |
| write_generic_template | Man page Source code |
