Nothing
pca.outlier
: add prefix to ellipse to avoid conflict with package car.corrgram.circle
and corrgram.ellipse
: move 'scales' into argument list.cl.auc
: adjust auc: if (auc < 0.5) auc <- 1 - auc
accest
: Fix bugs and add more output.cl.roc
: change output and fix bugs.cl.roc
: add output of positive level.cl.perf
: add confusion matrix, Kappa and positive outputs.plsc
: minor changes for returned component pls.out so that R2 can be
applied.plslda
: minor changes for returned component pls.out so that R2 can be
applied.classifier
: bugs fixdf.summ
: add dots argument and modify an user-defined function.stats.vec
and stats.mat
: summarising two groups stats, such as
p-values.fs.cl.2
, perf
and perf.aam
: internal functions (21-01-2014).shrink.list
proprec.auto
as hidden function and tidy uppval.reject
: add na.rm = TRUE .grpplot
: remove xlab and ylab inside.mdsplot
and mds.plot.wrap
for MDS plotting.panel.elli
and panel.elli.1
panel.outl
for labelling data points outside ellipse. They can be
considered as outliers..path.package
is defunct so use path.package
instead in csv2xls
.pls:::coef.mvr
replace coef.mvr
since it hides in the new version
of 'pls'.stats.mat
and stats.vec
.stats.mat
only.pca.outlier
and pca.outlier.1
. The former is
lattice version and the later is the basic graphics version.stats.vec
and stats.mat
. So
the results are numeric, not character.melt
and ddply
with base R functions. So no need to load two
packages reshape
and plyr
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