| aggregateByAgeGroups | Aggregate population counts into age groups |
| contactMatrixAgeSchool | Calculate a contact matrix for age groups and schools |
| contactMatrixPolymod | Calculate a contact matrix for age groups based on Polymod... |
| contactMatrixPropPref | Calculate group contact matrix with proportional mixing and... |
| disaggregateCityAges | Disaggregate ACS 5-year age groups into single-year ages |
| finalsize | Calculate final outbreak size or distribution of a multigroup... |
| getCensusData | Get Census Population Data by Age and County |
| getCensusDataPath | Get path to example census data file |
| getCityData | Get City Population Data by Age |
| getFinalSizeAnalytic | Calculate final size of outbreak: the total number of... |
| getFinalSizeDist | Estimate the distribution of final outbreak sizes by group... |
| getFinalSizeDistEscape | Estimate the distribution of final outbreak sizes by group... |
| getFinalSizeODE | Calculate outbreak final size, the total number of infections... |
| getSizeAtTime | Calculate outbreak size at a given time |
| getStateFIPS | Get state FIPS code by state name |
| listCounties | List available counties for a state |
| odeSIR | Ordinary differential equation function for multi-group... |
| processCensusDataBySex | Process census data with sex disaggregation |
| processCensusDataTotal | Process census data without sex disaggregation |
| run_my_app | Runs the shiny app |
| transmissionRates | Calculate transmission rate matrix for multi-group model with... |
| vaxrepnum | Calculate reproduction number for a multigroup model with a... |
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