getSizeAtTime: Calculate outbreak size at a given time

In multigroup.vaccine: Analyze Outbreak Models of Multi-Group Populations with Vaccination

Calculate outbreak size at a given time

Description

Calculate outbreak size at a given time

Usage

getSizeAtTime(time, transmrates, recoveryrate, popsize, initR, initI, initV)

Arguments

time	the time at which to calculate the outbreak size
transmrates	matrix of group-to-group (column-to-row) transmission rates
recoveryrate	inverse of mean infectious period
popsize	the population size of each group
initR	initial number of each group already infected and removed (included in size result)
initI	initial number of each group infectious
initV	initial number of each group vaccinated

Value

a list with totalSize (total cumulative infections) and activeSize (total currently infected) in each group at the specified time

Examples

getSizeAtTime(time = 30, transmrates = matrix(0.2, 2 ,2), recoveryrate = 0.3,
popsize = c(100, 150), initR = c(0, 0), initI = c(0, 1), initV = c(10, 10))

multigroup.vaccine documentation built on Sept. 19, 2026, 1:06 a.m.