mc_calc_gdd: Growing Degree Days

In myClim: Microclimatic Data Processing

Growing Degree Days

Description

This function creates a new virtual sensor for each locality within myClim data object. The new virtual sensor provides values of GDD (Growing Degree Days) in degees Celsius for each time step in the original timeseries.

Usage

mc_calc_gdd(data, sensor, output_prefix = "GDD", t_base = 5, localities = NULL)

Arguments

data	cleaned myClim object see myClim-package
sensor	name of temperature sensor used for GDD calculation e.g. TMS_T3 see names(mc_data_sensors)
output_prefix	name prefix of new GDD sensor (default "GDD" -> "GDD5_TMS_T3") name of output sensor consists of output_prefix and value t_base e.g. GDD5
t_base	base temperature for calculation of GDD (default 5°C)
localities	list of locality_ids for calculation; if NULL then all (default NULL)

Details

Function calculates growing degree days as follows: GDD = max(0;(T - Tbase)) . period(days) The maximum allowed time step length for GDD calculation is one day. Function creates a new virtual sensor with the same time step as input data. For shorter time steps than one day, the GDD value is the contribution of the interval to the growing degree day, assuming constant temperature over this period. Be careful while aggregating growing degree days to longer periods, because only meaningful aggregation function here is sum, but myClim let you apply any aggregation function see mc_agg().

Value

The same myClim object as input but with added virtual GDD sensor

Examples

gdd_data <- mc_calc_gdd(mc_data_example_agg, "TMS_T3", localities = c("A2E32", "A6W79"))
gdd_agg <- mc_agg(gdd_data, list(TMS_T3=c("min", "max"), GDD5="sum"), period="day")

myClim documentation built on Oct. 21, 2024, 5:07 p.m.