naaccr_factor: Replace NAACCR codes with understandable factors

In naaccr: Read Cancer Records in the NAACCR Format

Replace NAACCR codes with understandable factors

Description

Replace NAACCR codes with understandable factors

Usage

naaccr_factor(x, field, keep_unknown = FALSE, ...)

Arguments

x	Vector (usually character) of codes.
field	String giving the XML name of the NAACCR field to code.
keep_unknown	Logical indicating whether values of "unknown" should be a level in the factor or NA.
...	Additional arguments passed onto factor.

Value

A factor vector version of x. The levels are short descriptions instead of the basic NAACCR codes. Codes which stood for "unknown" with no further information are replaced with NA.

If field names a text or site-specific field, x will be returned unchanged with a warning.

Examples

  naaccr_factor(c("20", "43", "99"), "radRegionalRxModality")
  naaccr_factor(c("USA", "GER", "XEN"), "addrAtDxCountry")
  # Default: NA for unknowns,
  naaccr_factor(c("1", "8", "9"), "tumorGrowthPattern")
  naaccr_factor(c("1", "8", "9"), "tumorGrowthPattern", keep_unknown = TRUE)

naaccr documentation built on Sept. 20, 2024, 5:07 p.m.