Files in netmhc2pan
Interface to 'NetMHCIIpan'
MD5
NAMESPACE
DESCRIPTION
R/is_netmhc2pan_haplotype.R
R/is_on_ci.R
R/check_fasta_file_sequence_lengths.R
R/download_netmhc2pan_bin.R
R/predict_ic50s.R
R/check_alleles.R
R/check_netmhc2pan_data_url.R
R/check_netmhc2pan_installation.R
R/install_netmhc2pan_data.R
R/get_netmhc2pan_url.R
R/netmhc2pan_report.R
R/get_netmhc2pan_alleles.R
R/get_netmhc2pan_data_url.R
R/create_temp_fasta_filename.R
R/default_params_doc.R
R/install_netmhc2pan_data_from_file.R
R/predict_ic50.R
R/is_netmhc2pan_installed.R
R/is_url_valid.R
R/check_netmhc2pan_bin_url.R
R/get_netmhc2pan_archive_filename.R
R/capitalize_first_char.R
R/install_netmhc2pan_from_files.R
R/read_netmhc2pan_xls_output.R
R/get_netmhc2pan_bin_url.R
R/uninstall_netmhc2pan.R
R/install_netmhc2pan_bin_from_file.R
R/get_default_netmhc2pan_bin_path.R
R/netmhc2pan.R
R/get_default_netmhc2pan_subfolder.R
R/get_default_netmhc2pan_bin_tarfile_path.R
R/check_can_create_file.R
R/create_temp_xls_filename.R
R/set_up_netmhc2pan.R
R/install_netmhc2pan.R
R/run_netmhc2pan.R
R/get_default_netmhc2pan_version.R
R/get_default_netmhc2pan_folder.R
R/to_netmhc2pan_name.R
R/netmhc2pan_self_test.R
R/install_netmhc2pan_bin.R
inst/WORDLIST
inst/doc/demo.Rmd
inst/doc/demo.R
inst/doc/demo.html
inst/extdata/result_filter.txt
inst/extdata/example2.xls
inst/extdata/example.fasta
inst/extdata/result.xls
inst/extdata/result.txt
inst/extdata/example2.fasta
inst/extdata/result_filter.xls
inst/extdata/example.xls
build/vignette.rds
vignettes/demo.Rmd
man/install_netmhc2pan.Rd
man/create_temp_fasta_filename.Rd
man/get_netmhc2pan_url.Rd
man/check_netmhc2pan_bin_url.Rd
man/install_netmhc2pan_bin.Rd
man/get_default_netmhc2pan_bin_path.Rd
man/get_netmhc2pan_alleles.Rd
man/is_netmhc2pan_installed.Rd
man/predict_ic50.Rd
man/get_netmhc2pan_data_url.Rd
man/get_default_netmhc2pan_subfolder.Rd
man/install_netmhc2pan_data.Rd
man/get_default_netmhc2pan_bin_tarfile_path.Rd
man/set_up_netmhc2pan.Rd
man/check_netmhc2pan_installation.Rd
man/install_netmhc2pan_data_from_file.Rd
man/run_netmhc2pan.Rd
man/create_temp_xls_filename.Rd
man/to_netmhc2pan_name.Rd
man/netmhc2pan_self_test.Rd
man/is_netmhc2pan_set_up.Rd
man/get_netmhc2pan_archive_filename.Rd
man/check_alleles.Rd
man/netmhc2pan_report.Rd
man/uninstall_netmhc2pan.Rd
man/is_tcsh_installed.Rd
man/is_netmhc2pan_haplotype.Rd
man/get_netmhc2pan_bin_url.Rd
man/install_netmhc2pan_bin_from_file.Rd
man/is_on_github_actions.Rd
man/is_on_ci.Rd
man/get_default_netmhc2pan_version.Rd
man/read_netmhc2pan_xls_output.Rd
man/check_can_create_file.Rd
man/default_params_doc.Rd
man/install_netmhc2pan_from_files.Rd
man/is_on_appveyor.Rd
man/download_netmhc2pan_bin.Rd
man/is_on_travis.Rd
man/netmhc2pan.Rd
man/predict_ic50s.Rd
man/get_default_netmhc2pan_folder.Rd
man/is_netmhc2pan_bin_installed.Rd
man/is_netmhc2pan_data_installed.Rd
man/capitalize_first_char.Rd
man/check_netmhc2pan_data_url.Rd
man/is_url_valid.Rd
man/check_fasta_file_sequence_lengths.Rd
man/figures/GitHubActions.png
man/figures/AppVeyor.png
man/figures/TravisCI.png
man/figures/Codecov.png
