plot.NMF | R Documentation |

Only if J is specified as a vector longer than 1, this function will be active.

Koki Tsuyuzaki

Jean-Philippe Brunet. et. al., (2004). Metagenes and molecular pattern discovery using matrix factorization. *PNAS*

Xiaoxu Han. (2007). CANCER MOLECULAR PATTERN DISCOVERY BY SUBSPACE CONSENSUS KERNEL CLASSIFICATION

Attila Frigyesi. et. al., (2008). Non-Negative Matrix Factorization for the Analysis of Complex Gene Expression Data: Identification of Clinically Relevant Tumor Subtypes. *Cancer Informatics*

Haesun Park. et. al., (2019). Lecture 3: Nonnegative Matrix Factorization: Algorithms and Applications. *SIAM Gene Golub Summer School, Aussois France, June 18, 2019*

Chunxuan Shao. et. al., (2017). Robust classification of single-cell transcriptome data by nonnegative matrix factorization. *Bioinformatics*

Paul Fogel (2013). Permuted NMF: A Simple Algorithm Intended to Minimize the Volume of the Score Matrix

Philip M. Kim. et. al., (2003). Subsystem Identification Through Dimensionality Reduction of Large-Scale Gene Expression Data. *Genome Research*

Lucie N. Hutchins. et. al., (2008). Position-dependent motif characterization using non-negative matrix factorization. *Bioinformatics*

Patrik O. Hoyer (2004). Non-negative Matrix Factorization with Sparseness Constraints. *Journal of Machine Learning 5*

```
methods(class = "NMF")
```

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