Man pages for nonmem2R
Loading NONMEM Output Files with Functions for Visual Predictive Checks (VPC) and Goodness of Fit (GOF) Plots
| add.caption | Add caption to ggplot object |
| basic.eta.GOF | Histogram and/or QQ-norm GOF for ETA's |
| basic.GOF4 | Basic 4- and 6-panel GOF |
| covload | Load the covariance matrix from a nonmem .cov output file. |
| covload.sub.table | Internal package function |
| do.cat.GOF | Y vs categorical X GOF-plot |
| do.individual.GOF | Individual GOF-plots |
| do.multi.GOF | Multiple Y vs single X GOF-plot |
| do.one.GOF | X-Y GOF-plot |
| eta.cov.GOF | Covariate and pairs ETA GOFs |
| extFormat | Internal package function |
| extload | Load final parameter values from a nonmem .ext output file. |
| extload.sub.table | Internal package function |
| extToTable | Compile parameter table suitable for reports |
| extTransform | Internal package function |
| get.GOF.dictionary | Get, set, and modify the global (or local) GOF parameters and... |
| get.label | Labels for known NONMEM variables |
| get.model.path | Get and set model.path |
| grid.sim | Combine fix grid and simulated grid based on multivariate... |
| grid.sim.internal1 | Internal function |
| grid.sim.internal2 | Internal function |
| grid.sim.internal3 | Internal function |
| histGOF | Histogram GOF |
| merge2GOF | Merging 2, 4, or 6 GOF's into one graph |
| modload | Show model file |
| position_scale | Position for scaling y |
| PositionScale | ggproto for position_scale |
| print.extToTable | Print function for compiled summary information of class... |
| print.modload | Print function for loaded mod file |
| print.sumoR | Print function for compiled summary information of class... |
| qqnormGOF | QQ-norm GOF |
| readVpc | Internal package function |
| stat_corr | Adding correlation to x-y plots |
| StatCorr | ggproto for stat_corr |
| stat_denx | Density for x in x-y plot |
| StatDenx | ggproto for stat_denx |
| stat_dnorm | Normal density |
| StatDnorm | ggproto for stat_dnorm |
| stat_hmean | Horizontal reference at mean |
| StatHmean | ggproto for stat_hmean |
| stat_hmedian | Horizontal reference at median |
| StatHmedian | ggproto for stat_hmedian |
| stat_QQnorm | Quantile-Quantile Plots |
| StatQQnorm | ggproto for stat_QQnorm |
| stat_QQrefline | Add reference line to Quantile-Quantile Plots |
| StatQQrefline | ggproto for stat_QQrefline |
| stat_QQVPC | Add VPC confidence interval for Quantile-Quantile Plots |
| StatQQVPC | ggproto for stat_QQVPC |
| sumoR | Compile summary information for NONMEM model based on the lst... |
| sumoRU | Internal package function |
| systemPSN | Run qpsn system call |
| test.grid.sim | Function for testing grid.sim and compare with rmvnorm |
| vpcfig | Visual Predictive Check (VPC) based on Perl-speaks-NONMEM... |
| vpcfig2 | Visual Predictive Check (VPC) based on Perl-speaks-NONMEM... |
| vpcfig3 | Visual Predictive Check (VPC) based on raw Perl-speaks-NONMEM... |
