oceanmap: A Plotting Toolbox for 2D Oceanographic Data

Plotting toolbox for 2D oceanographic data (satellite data, sst, chla, ocean fronts & bathymetry). Recognized classes and formats include ncdf4, Raster, '.nc' and '.gz' files.

AuthorRobert K. Bauer
Date of publication2016-09-16 12:50:28
MaintainerRobert K. Bauer <robert.bauer@ird.fr>
LicenseGPL (>= 3)
Version0.0.2

View on CRAN

Man pages

add.region: adding a region to the region_definitions file

area_extrac: Extracts a pre-defined region from ".gz"-file and saves...

bindate2Title: returns formatted date string for v-plot titles

check_gzfiles: Returns summary on ".gz"-file types

check_ts: checks if daily ".gz"-file time series is complete

clim_plot: plots ".gz"-file climatologies

close_fig: function to close current graphic device

cmap: color maps

cust.colorbar: defines colorbar settings for 'v.raster' and...

delete.region: deletes a region from the region_definitions-definition file

digits: returns recognized number of digits for colorbar ticklabels

empty.plot: Creates an empty scatter plot

figure: generate (and save) graphic devices with flexible fileformat...

get.bathy: Returns bathymetric data from the NOAA ETOPO1 database as...

get.cb.pos: Returns additional colorbar placement information

internal.datasets: internal datasets

matrix2raster: Converts a matrix to a RasterLayer or arrays to a...

name_join: create "'.gz"-filenames from a list or dataframe

name_split: Returns a summary data frame of ".gz" encoded oceanography...

nc2raster: Convert Raster layer to a matrix or array

nc2time: reads and converts the time variable of a netcdf-file...

oceanmap: oceanmap - plot tools for 2D oceanographic data

param_convert: converts byte data to absolte values or vise versa...

parameter_definitions: parameter definitions dataframe

plotmap: plots landmask of a defined region

raster2matrix: Convert Raster layer to a matrix or array

readbin: Returns ".gz"-file as matrix or raster-object

region2SpatialPolygon: creates polygon from raster extent

region_definitions: region definitions dataframe

regions: Returns two-row summary table of a specified region.

set.colorbar: Adds colorbar to an extisting plot device

v: Ploting 2D oceanographic data

v-classes: v-classes

worldmap: World Map

writebin: Saves geographic data as byte file (".gz")

Files in this package

oceanmap
oceanmap/inst
oceanmap/inst/doc
oceanmap/inst/doc/oceanmap.pdf
oceanmap/inst/test_files
oceanmap/inst/test_files/med4_avhrr_p100_4km_1m_20030601_20030630.smoothgrad.0.04-3-5.edge.gz
oceanmap/inst/test_files/med4_modis_chla_4km_1s_20030601_20120831.smoothgrad.0.01-3-5.gz
oceanmap/inst/test_files/medw4_modis_sst2_4km_1d_20020707_20020707.r2010.0.qual0.gz
oceanmap/inst/test_files/med4_modis_chla_4km_1s_20030901_20121130.smoothgrad.0.01-3-5.gz
oceanmap/inst/test_files/herring_lavae.nc
oceanmap/inst/test_files/copyrights
oceanmap/inst/test_files/med4_modis_chla_4km_1s_20030301_20120531.smoothgrad.0.01-3-5.gz
oceanmap/inst/test_files/med4_modis_chlagrad_4km_1d_20020720_20020720.R2012.0.gauss3.sobel3.gz
oceanmap/inst/test_files/med4_avhrr_sst2_4km_1m_20000801_20090831.smoothgrad.0.04-3-5.edge.gz
oceanmap/inst/test_files/med4_modis_chla_4km_1s_20030228_20121201.smoothgrad.0.01-3-5.gz
oceanmap/inst/test_files/medw4_modis_sst2_4km_1d_20020704_20020704.r2010.0.qual0.gz
oceanmap/inst/test_files/medw4_modis_sst2_4km_1d_20020705_20020705.r2010.0.qual0.gz
oceanmap/inst/test_files/topo.v02.nc
oceanmap/NAMESPACE
oceanmap/data
oceanmap/data/region_definitions.bkp_old.rda
oceanmap/data/cmap.rda
oceanmap/data/region_definitions.bkp.rda
oceanmap/data/parameter_definitions.rda
oceanmap/data/datalist
oceanmap/data/cmap_topo.rda
oceanmap/data/region_definitions.rda
oceanmap/R
oceanmap/R/check.folder.r
oceanmap/R/v.raster.r
oceanmap/R/writebin.r
oceanmap/R/raster2matrix.r
oceanmap/R/area_extrac.r
oceanmap/R/get.cb.pos.r
oceanmap/R/bindate2main.r
oceanmap/R/check_ts.r
oceanmap/R/get.bathy.r
oceanmap/R/param_unconvert.r
oceanmap/R/get.grid.res.r
oceanmap/R/bindate2Title.r
oceanmap/R/name_join.r
oceanmap/R/plotmap.r
oceanmap/R/cust.colorbar.r
oceanmap/R/sysdata.rda
oceanmap/R/check_gzfiles.r
oceanmap/R/readbin.r
oceanmap/R/nc2time.r
oceanmap/R/bindate2ylab.r
oceanmap/R/region2SpatialPolygon.r
oceanmap/R/get.worldmap.r
oceanmap/R/name_split.r
oceanmap/R/param_convert.r
oceanmap/R/add.region.r
oceanmap/R/delete.region.r
oceanmap/R/figure.r
oceanmap/R/set.colorbarp.r
oceanmap/R/regions.r
oceanmap/R/nc2raster.r
oceanmap/R/v.gz.r
oceanmap/R/matrix2raster.r
oceanmap/R/v.r
oceanmap/R/set.colorbar.r
oceanmap/R/digits.r
oceanmap/R/v.plot.r
oceanmap/R/clim_plot.r
oceanmap/R/empty.plot.r
oceanmap/MD5
oceanmap/DESCRIPTION
oceanmap/ChangeLog
oceanmap/man
oceanmap/man/regions.Rd oceanmap/man/name_split.Rd oceanmap/man/clim_plot.Rd oceanmap/man/parameter_definitions.Rd oceanmap/man/check_ts.Rd oceanmap/man/close_fig.Rd oceanmap/man/set.colorbar.Rd oceanmap/man/region_definitions.Rd oceanmap/man/nc2raster.Rd oceanmap/man/get.cb.pos.Rd oceanmap/man/oceanmap.Rd oceanmap/man/empty.plot.Rd oceanmap/man/matrix2raster.Rd oceanmap/man/v.Rd oceanmap/man/bindate2Title.Rd oceanmap/man/v-classes.Rd oceanmap/man/cust.colorbar.Rd oceanmap/man/param_convert.Rd oceanmap/man/check_gzfiles.Rd oceanmap/man/worldmap.Rd oceanmap/man/delete.region.Rd oceanmap/man/readbin.Rd oceanmap/man/writebin.Rd oceanmap/man/digits.Rd oceanmap/man/add.region.Rd oceanmap/man/plotmap.Rd oceanmap/man/area_extrac.Rd oceanmap/man/nc2time.Rd oceanmap/man/cmap.Rd oceanmap/man/figure.Rd oceanmap/man/region2SpatialPolygon.Rd oceanmap/man/get.bathy.Rd oceanmap/man/internal.datasets.Rd oceanmap/man/name_join.Rd oceanmap/man/raster2matrix.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.