sample.data: Sample Input & Output pSI Data Sets

In pSI: Specificity Index Statistic

Description

Sample expression matrix and sample specificity index statistic (pSI) output data sets used to illustrate the pSI package functions. NOTE:Supplementary data (human & mouse expression sets, calculated pSI datasets, etc.) can be found in pSI.data package located at the following URL: http://genetics.wustl.edu/jdlab/psi_package/

Format

List comprised of two data frames.

Details

Sample expression matrix is the Brainspan RNAseq data condensed into 6 major regional divisions for just the young adult regions. Sample pSI output data set is calculated from the young adulthood Brainspand RNAseq data just previously described.

Source

http://www.brainspan.org

Examples

data(sample.data)

Example output

Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.

Attaching package: 'gdata'

The following object is masked from 'package:stats':

    nobs

The following object is masked from 'package:utils':

    object.size

The following object is masked from 'package:base':

    startsWith

pSI documentation built on May 1, 2019, 10:28 p.m.