API for pafr
Read, Manipulate and Visualize 'Pairwise mApping Format' Data
| Global functions | |
|---|---|
| .make_numeric | Source code |
| .per_row | Source code |
| Gb_lab | Man page Source code |
| Kb_lab | Man page Source code |
| Mb_lab | Man page Source code |
| add_pos_in_concatentaed_genome | Source code |
| as_paf | Man page Source code |
| check_ordering | Source code |
| chrom_sizes | Man page Source code |
| dotplot | Man page Source code |
| dotplot_name_df | Source code |
| filter_secondary_alignments | Man page Source code |
| ggplot_add.dotplot_hl | Source code |
| highlight_dotplot | Source code |
| highlight_query | Man page Source code |
| highlight_target | Man page Source code |
| is_numericable | Source code |
| is_numericable.character | Source code |
| is_numericable.factor | Source code |
| is_numericable.numeric | Source code |
| order_seqs | Source code |
| plot_coverage | Man page Source code |
| plot_synteny | Man page Source code |
| print.dotplot_hl | Source code |
| print.pafr | Source code |
| print_alignment | Source code |
| print_pafr_rows | Source code |
| process_tags | Source code |
| read_bed | Man page Source code |
| read_paf | Man page Source code |
| synteny_data | Source code |
| theme_coverage_plot | Man page |
