pancor: Calculation and Plot of Gene Correlationship in TCGA/GTEx/CCLE

The data of TCGA (The Cancer Genome Atlas), GTEx (Genotype-Tissue Expression), and CCLE (Broad Institute Cancer Cell Line Encyclopedia) are downloaded and preprocessed. With the help of 'pancor', one can easily calculate the correlation of two gene in any cancer type. Reference: Huang, H. (2019) <doi:10.1038/s41586-019-1016-7>.

Getting started

Package details

AuthorZhougeng Xu [aut, cre], Shipeng Guo [aut, ctb]
MaintainerZhougeng Xu <[email protected]>
LicenseArtistic-2.0
Version0.1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("pancor")

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pancor documentation built on Oct. 30, 2019, 10:04 a.m.