pancor: caculate the correlatship ratio in pancancer
In pancor: Calculation and Plot of Gene Correlationship in TCGA/GTEx/CCLE
Description
Usage
Arguments
Value
Author(s)
Examples
Description
caculate the correlatship ratio in pancancer
Usage
1
Arguments
data
data.frame
gene1
charactor of gene name, e.g. "METTL3"
gene2
charactor of gene name, e.g. "SETD2"
cor.test.method
cor.test method, one of
"pearson", "kendall", "spearman", default is "pearson"
Value
data.frame contains the genes correlation
Author(s)
Shipeng Guo, Zhougeng Xu
Examples
1
2
data(pancancer_small)
pancor(pancancer_small, "METTL3", "SETD2")
pancor documentation built on Oct. 30, 2019, 10:04 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
caculate the correlatship ratio in pancancer
Usage
1 |
Arguments
data |
data.frame |
gene1 |
charactor of gene name, e.g. "METTL3" |
gene2 |
charactor of gene name, e.g. "SETD2" |
cor.test.method |
cor.test method, one of "pearson", "kendall", "spearman", default is "pearson" |
Value
data.frame contains the genes correlation
Author(s)
Shipeng Guo, Zhougeng Xu
Examples
1 2 | data(pancancer_small)
pancor(pancancer_small, "METTL3", "SETD2")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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