default_output_template: A sample output template for pastis_main and pastis_simple

In pastis: Phylogenetic Assembly with Soft Taxonomic Inferences

Description

This is the default output template filled in by pastis_main and pastis_simple to create the input file for mrBayes.

Usage

  default_output_template()

Details

If you want to change the parameters in the mrBayes nexus file created by pastis then it is easier to create your own template rather than editing the created nexus files manually (which you would have to do again if you reran pastis).

This is the default template used by pastis and is a good starting point for creating your own template. To have a look at this template try:

cat(default_output_template())

Once you understand the format, you can create your own template as a string and pass it to pastis.

Value

The default output template

pastis documentation built on May 2, 2019, 7:24 a.m.