pastis-package: Phylogenetic Assembly with Soft Taxonomic Inferences.
In pastis: Phylogenetic Assembly with Soft Taxonomic Inferences
Description
Phylogenetic Assembly with Soft Taxonomic Inferences.
Details
Package: pastis
Type:
Package
Version: 0.1-2
Date: 2013-9-11
Depends: caper (>= 0.5.0), ape (>= 3.0.0)
Encoding: UTF-8
License: GPL (>= 3)
LazyLoad: yes
URL:
http://cran.r-project.org/web/packages/pastis/
A pre-processor for mrBayes that assimilates sequences,
taxonomic information and tree constraints. The main
functions of interest for most users will be
pastis_simple, pastis_main and conch. The main analysis
is conducted with pastis_simple or pastis_main followed
by a manual execution of mrBayes (>3.2). The placement of
taxa not contained in the tree constraint can be
investigated using conch.
Author(s)
Klaas Hartmann klaas.hartmann@utas.edu.au Gavin
Thomas gavin.thomas@sheffield.ac.uk
pastis documentation built on May 2, 2019, 7:24 a.m.
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Description
Phylogenetic Assembly with Soft Taxonomic Inferences.
Details
| Package: | pastis |
| Type: | Package |
| Version: | 0.1-2 |
| Date: | 2013-9-11 |
| Depends: | caper (>= 0.5.0), ape (>= 3.0.0) |
| Encoding: | UTF-8 |
| License: | GPL (>= 3) |
| LazyLoad: | yes |
| URL: | http://cran.r-project.org/web/packages/pastis/ |
A pre-processor for mrBayes that assimilates sequences, taxonomic information and tree constraints. The main functions of interest for most users will be pastis_simple, pastis_main and conch. The main analysis is conducted with pastis_simple or pastis_main followed by a manual execution of mrBayes (>3.2). The placement of taxa not contained in the tree constraint can be investigated using conch.
Author(s)
Klaas Hartmann klaas.hartmann@utas.edu.au Gavin Thomas gavin.thomas@sheffield.ac.uk
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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