Man pages for patPRO
Visualizing Temporal Microbiome Data
| mergeMapMetaData | Merge Mapping and Data Files |
| normalizeAlphaDiv | Normalize Alpha Diversity Values for Plotting. |
| patientMean | Calculate Mean Patient Values. |
| PatProAlphaDiv | Test Alpha Diversity Data Used as an Example for patPRO. |
| PatProBacLoad | Test Bacterial Load Data Used as an Example for patPRO. |
| PatProMap | Test Mapping File Data Used as an Example for patPRO. |
| PatProOTU | Test Relative Abundance Data Used as an Example for patPRO. |
| PatPro-package | Longitudinal Profiler of Microbiome Data |
| patproPlotThree | Generate Patient Profile of Three Plots. |
| patproPlotTwo | Generate Patient Profile of Two Plots. |
| plotBacterialLoad | Plot Supplemental Bacterial Load Information. |
| plotNormalizedAlphaDiv | Plot Normalized Alpha Diversity. |
| plotTopTaxa | Plot a Specific Patient Relative Abundance of Top Taxa. |
| plotTopTaxaMean | Plot the Mean Relative Abundance of Top Taxa. |
| topAbsAbundDataFrame | Format and Normalize Top Taxa and Bac Load for Plotting. |
| topAbsAbundPlot | Plot Top Taxa Abundance Normalized to Bacterial Load. |
| topRelAbundDataFrame | Format Top Taxa Data Frame for Graphing. |
| transposeRelAbund | Transpose a Data Frame. |
