API for pcvr
Plant Phenotyping and Bayesian Statistics
| Global functions | |
|---|---|
| .absWUE | Source code |
| .add_sigma_bounds | Source code |
| .applyOutlierMethod | Source code |
| .ari_mvss_hlp | Source code |
| .barg.brmsfit | Source code |
| .barg.conjugate | Source code |
| .bessel.inv | Source code |
| .betaHDE | Source code |
| .binomialBrmSurvPlot | Source code |
| .boundary.to.radians | Source code |
| .brmDparHelper | Source code |
| .brmFamilyHelper | Source code |
| .brmLongitudinalPlot | Source code |
| .brmLongitudinalPlotSetup | Source code |
| .brmSS | Source code |
| .brmStaticPlot | Source code |
| .brmViolinEllipsis | Source code |
| .brmViolinFixedHypothesis | Source code |
| .brmsChangePointHelper | Source code |
| .brmsMakeSurvPriors | Source code |
| .brmsSurvSS | Source code |
| .brms_form_beta | Source code |
| .brms_form_bragg | Source code |
| .brms_form_decay | Source code |
| .brms_form_doublegompertz | Source code |
| .brms_form_doublelogistic | Source code |
| .brms_form_exponential | Source code |
| .brms_form_frechet | Source code |
| .brms_form_gam | Source code |
| .brms_form_gompertz | Source code |
| .brms_form_gumbel | Source code |
| .brms_form_int | Source code |
| .brms_form_linear | Source code |
| .brms_form_logarithmic | Source code |
| .brms_form_logistic | Source code |
| .brms_form_lorentz | Source code |
| .brms_form_monomolecular | Source code |
| .brms_form_not_estimated | Source code |
| .brms_form_powerlaw | Source code |
| .brms_form_weibull | Source code |
| .brms_mvss | Source code |
| .brms_prior_predictive | Source code |
| .brmsurv_binomial_formula | Source code |
| .brmsurv_weibull_formula | Source code |
| .ci_rededge_mvss_hlp | Source code |
| .circular.mean | Source code |
| .conj_bayes_factor | Source code |
| .conj_bernoulli_sv | Source code |
| .conj_beta_mv | Source code |
| .conj_beta_sv | Source code |
| .conj_binomial_formatter | Source code |
| .conj_binomial_sv | Source code |
| .conj_biv_rough_sampling | Source code |
| .conj_bivariate_gaussian_sv | Source code |
| .conj_bivariate_lognormal_sv | Source code |
| .conj_bivariate_plot | Source code |
| .conj_bivariate_rope | Source code |
| .conj_bivariate_uniform_mv | Source code |
| .conj_bivariate_uniform_sv | Source code |
| .conj_cond_inv_rpareto | Source code |
| .conj_exponential_sv | Source code |
| .conj_gamma_sv | Source code |
| .conj_gaussian_mv | Source code |
| .conj_gaussian_sv | Source code |
| .conj_general_plot | Source code |
| .conj_lognormal2_mv | Source code |
| .conj_lognormal2_sv | Source code |
| .conj_lognormal_mv | Source code |
| .conj_lognormal_sv | Source code |
| .conj_negbin_sv | Source code |
| .conj_pareto_mv | Source code |
| .conj_pareto_sv | Source code |
| .conj_plot | Source code |
| .conj_poisson_sv | Source code |
| .conj_rope | Source code |
| .conj_rope_circular_diff | Source code |
| .conj_t_mv | Source code |
| .conj_t_sv | Source code |
| .conj_uniform_mv | Source code |
| .conj_uniform_sv | Source code |
| .conj_vonmises2_mv | Source code |
| .conj_vonmises2_sv | Source code |
| .conj_vonmises_mv | Source code |
| .conj_vonmises_sv | Source code |
| .conjugate.mv.sv.testing | Source code |
| .convert_gaussian_priors | Source code |
| .cri550_mvss_hlp | Source code |
| .cri700_mvss_hlp | Source code |
| .daeHelper | Source code |
| .decayChngptForm | Source code |
| .detectWideData | Source code |
| .distPlotPriorExtraction | Source code |
| .egi_mvss_hlp | Source code |
| .emdRaiseError | Source code |
| .evi_mvss_hlp | Source code |
| .explicitDefaultPrior | Source code |
| .exponentialChngptForm | Source code |
| .fixNumericPriors | Source code |
| .flexSurvSS | Source code |
| .formatListPriors | Source code |
| .formatNonIntegerTime | Source code |
| .formatSamples | Source code |
| .fqfm_mvss_hlp | Source code |
| .frechetChngptForm | Source code |
| .fremCollectOutputs | Source code |
| .fremPlotHelper | Source code |
| .fvfm_mvss_hlp | Source code |
| .gamChngptForm | Source code |
| .gammaHDE | Source code |
| .gdvi_mvss_hlp | Source code |
| .getSupport | Source code |
| .gompertzChngptForm | Source code |
| .groupInteractionPriors | Source code |
| .gumbelChngptForm | Source code |
| .handleSplineSegments | Source code |
| .initbeta | Source code |
| .initbragg | Source code |
| .initexponential | Source code |
| .initgompertz | Source code |
| .initializePriorObject | Source code |
| .initlinear | Source code |
| .initlogarithmic | Source code |
| .initlogistic | Source code |
| .initlorentz | Source code |
| .initmonomolecular | Source code |
| .initpowerlaw | Source code |
| .initweibull | Source code |
| .intChngptForm | Source code |
| .intModelHelper | Source code |
| .joyPlotFacetHelper | Source code |
| .joyPlotFormatData | Source code |
| .linearChngptForm | Source code |
| .lmGamAnova | Source code |
| .lmeGamAnova | Source code |
| .logarithmicChngptForm | Source code |
| .logisticChngptForm | Source code |
| .longEmdCalculation | Source code |
| .long_mv_cooks_outliers | Source code |
| .long_mv_mahalanobis_outliers | Source code |
| .long_sv_cooks_outliers | Source code |
| .longitudinalDists | Source code |
| .makePriors | Source code |
| .makeSurvData | Source code |
| .makeVecs | Source code |
| .mari_mvss_hlp | Source code |
| .matchGrowthModel | Source code |
| .mcari_mvss_hlp | Source code |
| .mgcvGamAnova | Source code |
| .mgcvSS | Source code |
| .monomolecularChngptForm | Source code |
| .mtci_mvss_hlp | Source code |
| .multiGrowthSim | Source code |
| .mvSampleFormatting | Source code |
| .mv_long_ag | Source code |
| .mv_ss_formula_builder | Source code |
| .mv_wide_ag | Source code |
| .ndre_mvss_hlp | Source code |
| .ndtWUE | Source code |
| .ndvi_mvss_hlp | Source code |
| .nlhypothesis | Source code |
| .nlmeDecay | Source code |
| .nlmeSS | Source code |
| .nlme_form_beta | Source code |
| .nlme_form_bragg | Source code |
| .nlme_form_doublegompertz | Source code |
| .nlme_form_doublelogistic | Source code |
| .nlme_form_exponential | Source code |
| .nlme_form_frechet | Source code |
| .nlme_form_gam | Source code |
| .nlme_form_gompertz | Source code |
| .nlme_form_gumbel | Source code |
| .nlme_form_linear | Source code |
| .nlme_form_logarithmic | Source code |
| .nlme_form_logistic | Source code |
| .nlme_form_lorentz | Source code |
| .nlme_form_monomolecular | Source code |
| .nlme_form_powerlaw | Source code |
| .nlme_form_weibull | Source code |
| .nlme_sigma_form | Source code |
| .nlrqDecay | Source code |
| .nlrqPseudoLRT | Source code |
| .nlrqSS | Source code |
| .nlrqTest | Source code |
| .nlrqTest2 | Source code |
| .nlrq_form_beta | Source code |
| .nlrq_form_bragg | Source code |
| .nlrq_form_doublegompertz | Source code |
| .nlrq_form_doublelogistic | Source code |
| .nlrq_form_exponential | Source code |
| .nlrq_form_frechet | Source code |
| .nlrq_form_gam | Source code |
| .nlrq_form_gompertz | Source code |
| .nlrq_form_gumbel | Source code |
| .nlrq_form_linear | Source code |
| .nlrq_form_logarithmic | Source code |
| .nlrq_form_logistic | Source code |
| .nlrq_form_lorentz | Source code |
| .nlrq_form_monomolecular | Source code |
| .nlrq_form_powerlaw | Source code |
| .nlrq_form_weibull | Source code |
| .nlrq_mvss | Source code |
| .nlsAnova | Source code |
| .nlsLongitudinalPlot | Source code |
| .nlsStaticPlot | Source code |
| .nls_mvss | Source code |
| .no_dummy_labels | Source code |
| .none_mvss_hlp | Source code |
| .outlierPlottingHelper | Source code |
| .parsePcvrForm | Source code |
| .partitionVarianceFrem | Source code |
| .pcaGeneralPlot | Source code |
| .pdf.handling | Source code |
| .plotPriorMarginPlots | Source code |
| .plot_gam_diff | Source code |
| .post.prob.from.pdfs | Source code |
| .post_pred_conj | Source code |
| .powerlawChngptForm | Source code |
| .pri_mvss_hlp | Source code |
| .prior_sampler | Source code |
| .prior_sens_conj | Source code |
| .psnd_caroteniods_mvss_hlp | Source code |
| .psnd_chlorophyll_a_mvss_hlp | Source code |
| .psnd_chlorophyll_b_mvss_hlp | Source code |
| .psri_mvss_hlp | Source code |
| .pssr_caroteniods_mvss_hlp | Source code |
| .pssr_chlorophyll_a_mvss_hlp | Source code |
| .pssr_chlorophyll_b_mvss_hlp | Source code |
| .radians.to.boundary | Source code |
| .rateWUE | Source code |
| .readpcvCheckDataState | Source code |
| .readpcvReshapeData | Source code |
| .rgri_mvss_hlp | Source code |
| .rqGamAnova | Source code |
| .rqLongitudinalPlot | Source code |
| .rqStaticPlot | Source code |
| .rvsi_mvss_hlp | Source code |
| .savi_mvss_hlp | Source code |
| .sigmaHelper | Source code |
| .simFreqs | Source code |
| .singleGrowthSim | Source code |
| .sipi_mvss_hlp | Source code |
| .specifyTestType | Source code |
| .sr_mvss_hlp | Source code |
| .stanStringHelper | Source code |
| .survModelParser | Source code |
| .survSS | Source code |
| .survTest | Source code |
| .timePlottingHelper | Source code |
| .unbiased.kappa | Source code |
| .vari_mvss_hlp | Source code |
| .vi_green_mvss_hlp | Source code |
| .weibullBrmSurvPlot | Source code |
| .weibullChngptForm | Source code |
| .wi_mvss_hlp | Source code |
| .wideEmdCalculation | Source code |
| .wide_mv_cooks_outliers | Source code |
| .wide_mv_mahalanobis_outliers | Source code |
| .wide_sv_cooks_outliers | Source code |
| as.conjugate | Source code |
| awkHelper | Man page Source code |
| barg | Man page Source code |
| brmPlot | Man page Source code |
| brmSurvPlot | Man page Source code |
| brmViolin | Man page Source code |
| bw.outliers | Man page Source code |
| bw.time | Man page Source code |
| bw.water | Man page Source code |
| checkGroups | Man page Source code |
| combineDraws | Man page Source code |
| conjugate | Man page Source code |
| conjugate-class | Man page |
| cumulativePheno | Man page Source code |
| distributionPlot | Man page Source code |
| emd1d | Source code |
| euc1d | Source code |
| fitGrowth | Man page Source code |
| fitGrowthbrms | Man page Source code |
| fitGrowthbrmsgam | Man page |
| fitGrowthflexsurv | Man page Source code |
| fitGrowthlm | Man page Source code |
| fitGrowthmgcvgam | Man page Source code |
| fitGrowthnlme | Man page Source code |
| fitGrowthnlmegam | Man page Source code |
| fitGrowthnlrq | Man page Source code |
| fitGrowthnlrqgam | Man page Source code |
| fitGrowthnls | Man page Source code |
| fitGrowthnlsgam | Man page Source code |
| fitGrowthrq | Man page Source code |
| fitGrowthsurvreg | Man page Source code |
| flexsurvregPlot | Man page Source code |
| frem | Man page Source code |
| gamPlot | Man page Source code |
| gam_diff | Man page Source code |
| growthPlot | Man page Source code |
| growthSS | Man page Source code |
| growthSim | Man page Source code |
| gsi_beta | Source code |
| gsi_bragg | Source code |
| gsi_doublegompertz | Source code |
| gsi_doublelogistic | Source code |
| gsi_exponential | Source code |
| gsi_frechet | Source code |
| gsi_gompertz | Source code |
| gsi_gumbel | Source code |
| gsi_linear | Source code |
| gsi_logarithmic | Source code |
| gsi_logistic | Source code |
| gsi_lorentz | Source code |
| gsi_monomolecular | Source code |
| gsi_powerlaw | Source code |
| gsi_weibull | Source code |
| inv_logit | Source code |
| lmPlot | Man page Source code |
| lmePlot | Source code |
| mvSS | Man page Source code |
| mvSim | Man page Source code |
| mv_ag | Man page Source code |
| net.plot | Man page Source code |
| nlmePlot | Man page Source code |
| nlrqPlot | Man page Source code |
| nlsPlot | Man page Source code |
| pcadf | Man page Source code |
| pcv.emd | Man page Source code |
| pcv.euc | Man page Source code |
| pcv.joyplot | Man page Source code |
| pcv.net | Man page Source code |
| pcv.plsr | Man page Source code |
| pcv.sub.read | Source code |
| pcv_theme | Man page Source code |
| pcvrss | Man page Source code |
| pcvrss-class | Man page |
| plot.conjugate | Man page Source code |
| plotPrior | Man page Source code |
| plotVIP | Man page Source code |
| print.conjugate | Man page Source code |
| print.conjugatesummary | Man page Source code |
| print.pcvrss | Man page Source code |
| print.pcvrsssummary | Man page Source code |
| pwue | Man page Source code |
| read.pcv | Man page Source code |
| read.pcv.3 | Man page Source code |
| relativeTolerance | Man page Source code |
| rqPlot | Man page Source code |
| summary.conjugate | Man page Source code |
| summary.pcvrss | Man page Source code |
| survregPlot | Man page Source code |
| testGrowth | Man page Source code |
| vip | Source code |
