Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.
|Author||Emmanuel Paradis [aut, cre, cph], Thibaut Jombart [aut, cph], Knaus Brian [aut, cph], Klaus Schliep [aut, cph], Alastair Potts [aut, cph], David Winter [aut, cph], Zhian N. Kamvar [aut, cph]|
|Maintainer||Emmanuel Paradis <[email protected]>|
|License||GPL (>= 2)|
|Package repository||View on CRAN|
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