Files in pegas
Population and Evolutionary Genetics Analysis System

MD5
NEWS
NAMESPACE
DESCRIPTION
R/theta.R R/R2.test.R R/Fst.R R/plotNetMDS.R R/site.spectrum.R R/VCFloci.R R/summary.loci.R R/conversion.R R/heterozygosity.R R/stairway.R R/amova.R R/sw.R R/mjn.R R/plot.loci.R R/nuc.div.R R/rr.test.R R/geo.R R/tajima.test.R R/IO.R R/options_themes_haploNet.R R/zzz.R R/F234.R R/dist.asd.R R/MMD.R R/haplotype.R R/allelicrichness.R R/hw.test.R
src/Makevars
src/summary_loci_pegas.c
src/pegas.c
src/readVCFbin.c
inst/CITATION
inst/doc/PlotHaploNet.R inst/doc/ReadingFiles.pdf inst/doc/PlotHaploNet.pdf inst/doc/ReadingFiles.R
inst/doc/ReadingFiles.Rnw
inst/doc/PlotHaploNet.Rnw
build/vignette.rds
build/partial.rdb
vignettes/pegas.bib
vignettes/tyty
vignettes/titi
vignettes/tata
vignettes/tutu
vignettes/ape.sty
vignettes/ReadingFiles.Rnw
vignettes/PlotHaploNet.Rnw
vignettes/toto
data/jaguar.rda
man/theta.msat.Rd man/replot.Rd man/dist.hamming.Rd man/F234.Rd man/subset.haplotype.Rd man/bind.loci.Rd man/na.omit.loci.Rd man/mjn.Rd man/R2.test.Rd man/hw.test.Rd man/LDscan.Rd man/site.spectrum.Rd man/utilities.Rd man/haploNet.Rd man/nuc.div.Rd man/haploFreq.Rd man/LD.Rd man/jaguar.Rd man/allelicrichness.Rd man/VCFloci.Rd man/haplotype.loci.Rd man/edit.loci.Rd man/read.vcf.Rd man/tajima.test.Rd man/sw.Rd man/cophenetic.haploNet.Rd man/dist.asd.Rd man/rr.test.Rd man/all.equal.haploNet.Rd man/read.loci.Rd man/theta.h.Rd man/by.loci.Rd man/summary.loci.Rd man/haplotype.Rd man/mutations.Rd man/amova.Rd man/read.gtx.Rd man/geoTrans.Rd man/theta.k.Rd man/hap.div.Rd man/write.loci.Rd man/pegas-package.Rd man/diffHaplo.Rd man/theta.tree.Rd man/conversion.Rd man/alleles2loci.Rd man/options_themes_haploNet.Rd man/stairway.Rd man/theta.s.Rd man/geod.Rd man/Fst.Rd man/MMD.Rd man/mst.Rd man/plotNetMDS.Rd man/heterozygosity.Rd
pegas documentation built on May 17, 2021, 9:08 a.m.