na.omit.loci: Missing Allelic Data

In pegas: Population and Evolutionary Genetics Analysis System

Description Usage Arguments Details Value Author(s) Examples

View source: R/conversion.R

Description

This is a method of the generic function na.omit.

Usage

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## S3 method for class 'loci'
na.omit(object, na.alleles = c("0", "."), ...)

Arguments

Details

The side effect of this function is to drop the rows (individuals) with unclearly identified genotypes, i.e., with at least one allele among na.alleles.

Other variables in the data table are eventually checked and levels with no observation (e.g., population) are dropped.

Value

an object of class "loci".

Author(s)

Emmanuel Paradis

Examples

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data(jaguar)
nrow(jaguar)
nrow(na.omit(jaguar))