API for penalized
L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model
| Global functions | |
|---|---|
| .checkinput | Source code |
| .coxfit | Source code |
| .coxmerge | Source code |
| .coxpredict | Source code |
| .cvl | Source code |
| .cvlapprox | Source code |
| .flasso | Source code |
| .getBeta2 | Source code |
| .getBetaLinear2 | Source code |
| .getFolds | Source code |
| .lasso | Source code |
| .lmfit | Source code |
| .lmmerge | Source code |
| .lmpredict | Source code |
| .logitfit | Source code |
| .logitmerge | Source code |
| .logitpredict | Source code |
| .makeP | Source code |
| .makepenfit | Source code |
| .modelswitch | Source code |
| .onAttach | Source code |
| .park | Source code |
| .poissonfit | Source code |
| .poissonmerge | Source code |
| .poissonpredict | Source code |
| .predictswitch | Source code |
| .ridge | Source code |
| .solve | Source code |
| .steplasso | Source code |
| [,breslow,ANY,ANY,ANY-method | Man page |
| [,breslow-method | Man page |
| [[,breslow-method | Man page |
| as.data.frame,breslow-method | Man page |
| as.data.frame,penfit-method | Man page |
| as.list,breslow-method | Man page |
| as.matrix,breslow-method | Man page |
| basehaz,penfit-method | Man page |
| basesurv | Man page |
| basesurv,penfit-method | Man page |
| breslow | Man page |
| breslow-class | Man page |
| coef,penfit-method | Man page |
| coefficients,penfit-method | Man page |
| contr.diff | Man page |
| contr.none | Man page Source code |
| cvl | Man page Source code |
| fitted,penfit-method | Man page |
| fitted.values,penfit-method | Man page |
| getdirec | Source code |
| linear.predictors | Man page |
| linear.predictors,penfit-method | Man page |
| loglik | Man page |
| loglik,penfit-method | Man page |
| nki70 | Man page |
| nonZero | Source code |
| oldRidge | Source code |
| opt.brent | Source code |
| optL1 | Man page Source code |
| optL2 | Man page Source code |
| penalized | Man page Source code |
| penalty | Man page |
| penalty,penfit-method | Man page |
| penfit | Man page |
| penfit-class | Man page |
| plot,breslow-method | Man page |
| plotpath | Man page Source code |
| predict | Man page |
| predict,penfit-method | Man page |
| profL1 | Man page Source code |
| profL2 | Man page Source code |
| residuals,penfit-method | Man page |
| root.brent | Source code |
| show,breslow-method | Man page |
| show,penfit-method | Man page |
| survival | Man page |
| survival,breslow-method | Man page |
| time,breslow-method | Man page |
| weights,penfit-method | Man page |
