API for penalized
L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model

Global functions
[,breslow,ANY,ANY,ANY-method Man page
[,breslow-method Man page
[[,breslow-method Man page
as.data.frame,breslow-method Man page
as.data.frame,penfit-method Man page
as.list,breslow-method Man page
as.matrix,breslow-method Man page
basehaz,penfit-method Man page
basesurv Man page
basesurv,penfit-method Man page
breslow Man page
breslow-class Man page
checkinput Source code
coef,penfit-method Man page
coefficients,penfit-method Man page
contr.diff Man page Source code
contr.none Man page Source code
coxfit Source code
coxmerge Source code
coxpredict Source code
cvl Man page Source code Source code
cvlapprox Source code
fitted,penfit-method Man page
fitted.values,penfit-method Man page
flasso Source code
getBeta2 Source code
getBetaLinear2 Source code
getFolds Source code
getdirec Source code
lasso Source code
linear.predictors Man page
linear.predictors,penfit-method Man page
lmfit Source code
lmmerge Source code
lmpredict Source code
logitfit Source code
logitmerge Source code
logitpredict Source code
loglik Man page
loglik,penfit-method Man page
makeP Source code
makepenfit Source code
modelswitch Source code
nki70 Man page
nonZero Source code
oldRidge Source code
onAttach Source code
opt.brent Source code
optL1 Man page Source code
optL2 Man page Source code
park Source code
penalized Man page Source code
penalty Man page
penalty,penfit-method Man page
penfit Man page
penfit-class Man page
plot,breslow-method Man page
plotpath Man page Source code
poissonfit Source code
poissonmerge Source code
poissonpredict Source code
predict Man page
predict,penfit-method Man page
predictswitch Source code
profL1 Man page Source code
profL2 Man page Source code
residuals,penfit-method Man page
ridge Source code
root.brent Source code
show,breslow-method Man page
show,penfit-method Man page
solve Source code
steplasso Source code
survival Man page
survival,breslow-method Man page
time,breslow-method Man page
tryNRstep Source code
weights,penfit-method Man page
penalized documentation built on May 30, 2017, 1:20 a.m.