cophenetic.networx: Pairwise Distances from a Phylogenetic Network
In phangorn: Phylogenetic Reconstruction and Analysis
cophenetic.networx R Documentation
Pairwise Distances from a Phylogenetic Network
Description
cophenetic.networx computes the pairwise distances between the pairs
of tips from a phylogenetic network using its branch lengths.
Usage
## S3 method for class 'networx'
cophenetic(x)
Arguments
x
an object of class networx.
Value
an object of class dist, names are set according to the tip
labels (as given by the element tip.label of the argument x).
Author(s)
Klaus Schliep
See Also
cophenetic for the generic function,
neighborNet to construct a network from a distance matrix
Examples
example(neighborNet)
cophenetic(nnet)
phangorn documentation built on Sept. 17, 2024, 5:08 p.m.
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| cophenetic.networx | R Documentation |
Pairwise Distances from a Phylogenetic Network
Description
cophenetic.networx computes the pairwise distances between the pairs
of tips from a phylogenetic network using its branch lengths.
Usage
## S3 method for class 'networx'
cophenetic(x)
Arguments
x |
an object of class |
Value
an object of class dist, names are set according to the tip
labels (as given by the element tip.label of the argument x).
Author(s)
Klaus Schliep
See Also
cophenetic for the generic function,
neighborNet to construct a network from a distance matrix
Examples
example(neighborNet)
cophenetic(nnet)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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