allTrees: Compute all trees topologies.
In phangorn: Phylogenetic Reconstruction and Analysis
View source: R/treeManipulation.R
allTrees R Documentation
Compute all trees topologies.
Description
allTrees computes all tree topologies for rooted or unrooted trees
with up to 10 tips. allTrees returns bifurcating trees.
Usage
allTrees(n, rooted = FALSE, tip.label = NULL)
Arguments
n
Number of tips (<=10).
rooted
Rooted or unrooted trees (default: rooted).
tip.label
Tip labels.
Value
an object of class multiPhylo.
Author(s)
Klaus Schliep klaus.schliep@gmail.com
See Also
rtree, nni
Examples
trees <- allTrees(5)
old.par <- par(no.readonly = TRUE)
par(mfrow = c(3,5))
for(i in 1:15)plot(trees[[i]])
par(old.par)
phangorn documentation built on Jan. 23, 2023, 5:37 p.m.
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View source: R/treeManipulation.R
| allTrees | R Documentation |
Compute all trees topologies.
Description
allTrees computes all tree topologies for rooted or unrooted trees
with up to 10 tips. allTrees returns bifurcating trees.
Usage
allTrees(n, rooted = FALSE, tip.label = NULL)
Arguments
n |
Number of tips (<=10). |
rooted |
Rooted or unrooted trees (default: rooted). |
tip.label |
Tip labels. |
Value
an object of class multiPhylo.
Author(s)
Klaus Schliep klaus.schliep@gmail.com
See Also
rtree, nni
Examples
trees <- allTrees(5) old.par <- par(no.readonly = TRUE) par(mfrow = c(3,5)) for(i in 1:15)plot(trees[[i]]) par(old.par)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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