pim: Fit Probabilistic Index Models

Fit a probabilistic index model as described in Thas et al <doi:10.1111/j.1467-9868.2011.01020.x>. The interface to the modeling function has changed in this new version. The old version is still available at R-Forge. You can install the old package using install.packages('pimold', repos = 'http://R-Forge.R-project.org').

Author
Joris Meys [aut, cre], Jan De Neve [aut], Nick Sabbe [aut]
Date of publication
2016-06-27 17:22:49
Maintainer
Joris Meys <Joris.Meys@UGent.be>
License
GPL (>= 2)
Version
2.0.0.2
URLs

View on CRAN

Man pages

add.poset
Add a poset to a pim.environment object
as.data.frame
Convert a pim.environment to a data frame
as.matrix.pim.summary
Convert a pim.summary object to a matrix
classes
Extract information from pim.environment and pim.poset...
coef
Extract the coefficients from a pim or pim.summary object
confint.pim
Calculate Wald confidence intervals around the coefficients...
create.poset
Create a poset
CreateScoreFun
Create a score function for use in a pim.
DysData
This is the Dysphagia data
EngelData
This is the engel data
estimators
Estimator functions for probabilistic index models
Extract.pim.summary
Extract method for pim.summary objects
FEVData
This is the Childhood respiratory disease data
formula
Extract the formula from a pim or pim.formula object
getters-pim.formula
Extract information from a pim.formula object
has.intercept
Check whether formula has an explicit intercept
is.complete
Check whether a pim environment is complete
L
Specify the left hand and right hand side of an expression...
make.posfun
Create a poset function
MHData
This is the Mental health data
model.matrix.pim
Create a model matrix for a probabilistic index model
new.pim
Create an object of class pim
new.pim.env
Constructor for a pim.environment
new.pim.formula
Constructor for pim.formula
new.pim.poset
Create a pim.poset environment
nobs
Extract the number of observations
P
Probability function
penv
Extract a pim environment from a model or formula
pim
Fitting a Probabilistic Index Model
pim-class
Class pim
pimdata
The data contained in the pim package
pim.environment-class
The pim.environment class
pim.fit
Fitter function for a probabilistic index model
pim.formula-class
Class pim.formula
pim-getters
Getters for slots of a pim object
pim-package
Probabilistic Index Models
pim.poset-class
The pim.poset class
pim.summary-class
Class pim.summary
poset
Extract the poset as a matrix or list
print
Print methods for the different object types
response
Extract response from a pim.formula or a pim object
sandwich.estimator
Pseudo-observation variance sandwich estimator
SUData
This is the Surgical unit data
summary.pim
The summary function for the pim class
vcov
Methods for vcov
vcov.estimators
vcov estimators for pim
vcov.internal
Internal functions for vcov estimation

Files in this package

pim
pim/inst
pim/inst/CITATION
pim/inst/doc
pim/inst/doc/pim.pdf
pim/inst/doc/pim.R
pim/inst/doc/pim.Rnw
pim/tests
pim/tests/testthat.R
pim/tests/testthat
pim/tests/testthat/test_pim.environments.R
pim/NAMESPACE
pim/data
pim/data/FEVData.rda
pim/data/SUData.rda
pim/data/DysData.rda
pim/data/EngelData.rda
pim/data/MHData.rda
pim/R
pim/R/penv.R
pim/R/pim.fit.R
pim/R/DysData.R
pim/R/new.pim.R
pim/R/sandwich.estimator.R
pim/R/model.matrix.pim.R
pim/R/create.poset.R
pim/R/vcov.internal.R
pim/R/pim.formula-class.R
pim/R/vcov.R
pim/R/new.pim.poset.R
pim/R/pim.environment-class.R
pim/R/confint.pim.R
pim/R/formula.R
pim/R/MHData.R
pim/R/SUData.R
pim/R/add.poset.R
pim/R/pim.summary-class.R
pim/R/new.pim.formula.R
pim/R/as.matrix.pim.summary.R
pim/R/new.pim.env.R
pim/R/pimdata.R
pim/R/coef.R
pim/R/LR.R
pim/R/pim-class.R
pim/R/nobs.R
pim/R/InternalObjects.R
pim/R/Estimators.R
pim/R/print.R
pim/R/poset.R
pim/R/as.data.frame.pim.environment.R
pim/R/is.complete.R
pim/R/Extract.pim.summary.R
pim/R/make.posfun.R
pim/R/Getters_pim.R
pim/R/CreateScoreFun.R
pim/R/InternalFunctions.R
pim/R/EngelData.R
pim/R/FEVData.R
pim/R/summary.R
pim/R/Getters.R
pim/R/pim-package.R
pim/R/pim.R
pim/R/Getters_pim.formula.R
pim/R/pim.poset-class.R
pim/R/zzz.R
pim/R/response.R
pim/R/vcov.estimators.R
pim/R/has.intercept.R
pim/R/P.R
pim/vignettes
pim/vignettes/PIMVignette.bib
pim/vignettes/pim.Rnw
pim/MD5
pim/build
pim/build/vignette.rds
pim/DESCRIPTION
pim/man
pim/man/new.pim.poset.Rd
pim/man/model.matrix.pim.Rd
pim/man/pim.poset-class.Rd
pim/man/classes.Rd
pim/man/pimdata.Rd
pim/man/add.poset.Rd
pim/man/vcov.estimators.Rd
pim/man/P.Rd
pim/man/FEVData.Rd
pim/man/penv.Rd
pim/man/as.matrix.pim.summary.Rd
pim/man/formula.Rd
pim/man/as.data.frame.Rd
pim/man/pim-getters.Rd
pim/man/estimators.Rd
pim/man/pim.Rd
pim/man/pim.fit.Rd
pim/man/DysData.Rd
pim/man/confint.pim.Rd
pim/man/nobs.Rd
pim/man/summary.pim.Rd
pim/man/pim-package.Rd
pim/man/new.pim.env.Rd
pim/man/has.intercept.Rd
pim/man/poset.Rd
pim/man/pim.formula-class.Rd
pim/man/Extract.pim.summary.Rd
pim/man/vcov.internal.Rd
pim/man/pim.environment-class.Rd
pim/man/is.complete.Rd
pim/man/make.posfun.Rd
pim/man/MHData.Rd
pim/man/pim.summary-class.Rd
pim/man/create.poset.Rd
pim/man/getters-pim.formula.Rd
pim/man/sandwich.estimator.Rd
pim/man/new.pim.formula.Rd
pim/man/L.Rd
pim/man/vcov.Rd
pim/man/print.Rd
pim/man/response.Rd
pim/man/new.pim.Rd
pim/man/EngelData.Rd
pim/man/coef.Rd
pim/man/pim-class.Rd
pim/man/CreateScoreFun.Rd
pim/man/SUData.Rd