pim: Fit Probabilistic Index Models

Fit a probabilistic index model as described in Thas et al <doi:10.1111/j.1467-9868.2011.01020.x>. The interface to the modeling function has changed in this new version. The old version is still available at R-Forge. You can install the old package using install.packages('pimold', repos = 'http://R-Forge.R-project.org').

AuthorJoris Meys [aut, cre], Jan De Neve [aut], Nick Sabbe [aut]
Date of publication2016-06-27 17:22:49
MaintainerJoris Meys <Joris.Meys@UGent.be>
LicenseGPL (>= 2)
Version2.0.0.2
http://r-forge.r-project.org/projects/pim/

View on CRAN

Man pages

add.poset: Add a poset to a pim.environment object

as.data.frame: Convert a pim.environment to a data frame

as.matrix.pim.summary: Convert a pim.summary object to a matrix

classes: Extract information from pim.environment and pim.poset...

coef: Extract the coefficients from a pim or pim.summary object

confint.pim: Calculate Wald confidence intervals around the coefficients...

create.poset: Create a poset

CreateScoreFun: Create a score function for use in a pim.

DysData: This is the Dysphagia data

EngelData: This is the engel data

estimators: Estimator functions for probabilistic index models

Extract.pim.summary: Extract method for pim.summary objects

FEVData: This is the Childhood respiratory disease data

formula: Extract the formula from a pim or pim.formula object

getters-pim.formula: Extract information from a pim.formula object

has.intercept: Check whether formula has an explicit intercept

is.complete: Check whether a pim environment is complete

L: Specify the left hand and right hand side of an expression...

make.posfun: Create a poset function

MHData: This is the Mental health data

model.matrix.pim: Create a model matrix for a probabilistic index model

new.pim: Create an object of class pim

new.pim.env: Constructor for a pim.environment

new.pim.formula: Constructor for pim.formula

new.pim.poset: Create a pim.poset environment

nobs: Extract the number of observations

P: Probability function

penv: Extract a pim environment from a model or formula

pim: Fitting a Probabilistic Index Model

pim-class: Class pim

pimdata: The data contained in the pim package

pim.environment-class: The pim.environment class

pim.fit: Fitter function for a probabilistic index model

pim.formula-class: Class pim.formula

pim-getters: Getters for slots of a pim object

pim-package: Probabilistic Index Models

pim.poset-class: The pim.poset class

pim.summary-class: Class pim.summary

poset: Extract the poset as a matrix or list

print: Print methods for the different object types

response: Extract response from a pim.formula or a pim object

sandwich.estimator: Pseudo-observation variance sandwich estimator

SUData: This is the Surgical unit data

summary.pim: The summary function for the pim class

vcov: Methods for vcov

vcov.estimators: vcov estimators for pim

vcov.internal: Internal functions for vcov estimation

Files in this package

pim
pim/inst
pim/inst/CITATION
pim/inst/doc
pim/inst/doc/pim.pdf
pim/inst/doc/pim.R
pim/inst/doc/pim.Rnw
pim/tests
pim/tests/testthat.R
pim/tests/testthat
pim/tests/testthat/test_pim.environments.R
pim/NAMESPACE
pim/data
pim/data/FEVData.rda
pim/data/SUData.rda
pim/data/DysData.rda
pim/data/EngelData.rda
pim/data/MHData.rda
pim/R
pim/R/penv.R pim/R/pim.fit.R pim/R/DysData.R pim/R/new.pim.R pim/R/sandwich.estimator.R pim/R/model.matrix.pim.R pim/R/create.poset.R pim/R/vcov.internal.R pim/R/pim.formula-class.R pim/R/vcov.R pim/R/new.pim.poset.R pim/R/pim.environment-class.R pim/R/confint.pim.R pim/R/formula.R pim/R/MHData.R pim/R/SUData.R pim/R/add.poset.R pim/R/pim.summary-class.R pim/R/new.pim.formula.R pim/R/as.matrix.pim.summary.R pim/R/new.pim.env.R pim/R/pimdata.R pim/R/coef.R pim/R/LR.R pim/R/pim-class.R pim/R/nobs.R pim/R/InternalObjects.R pim/R/Estimators.R pim/R/print.R pim/R/poset.R pim/R/as.data.frame.pim.environment.R pim/R/is.complete.R pim/R/Extract.pim.summary.R pim/R/make.posfun.R pim/R/Getters_pim.R pim/R/CreateScoreFun.R pim/R/InternalFunctions.R pim/R/EngelData.R pim/R/FEVData.R pim/R/summary.R pim/R/Getters.R pim/R/pim-package.R pim/R/pim.R pim/R/Getters_pim.formula.R pim/R/pim.poset-class.R pim/R/zzz.R pim/R/response.R pim/R/vcov.estimators.R pim/R/has.intercept.R pim/R/P.R
pim/vignettes
pim/vignettes/PIMVignette.bib
pim/vignettes/pim.Rnw
pim/MD5
pim/build
pim/build/vignette.rds
pim/DESCRIPTION
pim/man
pim/man/new.pim.poset.Rd pim/man/model.matrix.pim.Rd pim/man/pim.poset-class.Rd pim/man/classes.Rd pim/man/pimdata.Rd pim/man/add.poset.Rd pim/man/vcov.estimators.Rd pim/man/P.Rd pim/man/FEVData.Rd pim/man/penv.Rd pim/man/as.matrix.pim.summary.Rd pim/man/formula.Rd pim/man/as.data.frame.Rd pim/man/pim-getters.Rd pim/man/estimators.Rd pim/man/pim.Rd pim/man/pim.fit.Rd pim/man/DysData.Rd pim/man/confint.pim.Rd pim/man/nobs.Rd pim/man/summary.pim.Rd pim/man/pim-package.Rd pim/man/new.pim.env.Rd pim/man/has.intercept.Rd pim/man/poset.Rd pim/man/pim.formula-class.Rd pim/man/Extract.pim.summary.Rd pim/man/vcov.internal.Rd pim/man/pim.environment-class.Rd pim/man/is.complete.Rd pim/man/make.posfun.Rd pim/man/MHData.Rd pim/man/pim.summary-class.Rd pim/man/create.poset.Rd pim/man/getters-pim.formula.Rd pim/man/sandwich.estimator.Rd pim/man/new.pim.formula.Rd pim/man/L.Rd pim/man/vcov.Rd pim/man/print.Rd pim/man/response.Rd pim/man/new.pim.Rd pim/man/EngelData.Rd pim/man/coef.Rd pim/man/pim-class.Rd pim/man/CreateScoreFun.Rd pim/man/SUData.Rd

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