Global functions | |
---|---|
checkFiltering | Man page Source code |
checkFormat | Source code |
checkPlink | Man page Source code |
checkRemoveIDs | Man page Source code |
check_ancestry | Man page Source code |
check_het_and_miss | Man page Source code |
check_hwe | Man page Source code |
check_maf | Man page Source code |
check_relatedness | Man page Source code |
check_sex | Man page Source code |
check_snp_missingness | Man page Source code |
cleanData | Man page Source code |
evaluateDirection | Source code |
evaluate_check_ancestry | Man page Source code |
evaluate_check_het_and_miss | Man page Source code |
evaluate_check_relatedness | Man page Source code |
evaluate_check_sex | Man page Source code |
makepath | Source code |
overviewPerIndividualQC | Man page Source code |
overviewPerMarkerQC | Man page Source code |
perIndividualQC | Man page Source code |
perMarkerQC | Man page Source code |
plinkQC | Man page |
relatednessFilter | Man page Source code |
run_check_ancestry | Man page Source code |
run_check_heterozygosity | Man page Source code |
run_check_missingness | Man page Source code |
run_check_relatedness | Man page Source code |
run_check_sex | Man page Source code |
testNumerics | Man page Source code |
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